Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq14676 87.8 2e-12 >seq14676 Length=200364 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| ||||||||||| ||||| |||||||| || | || ||||| |||| |||| Sbjct 115173 CCTCATCTCTGCTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAACCCTCTCTTCT 115114 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | |||||||| || | || || || ||||| ||||| || || || || | |||||| | Sbjct 115113 TCAACCAAAAGATGGATGCAAAGGAGCCAGAGAAGAAAATTCCTTCCACTGCTGCAAAAG 115054 Query 17106 CGATTAATCGTTC 17118 | | || ||||| Sbjct 115053 CTACTACACGTTC 115041 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || ||||| ||||| || ||||||||||| || |||||||| ||||| || ||||| Sbjct 111806 ATGTAAGTATCTATGAGCAGACTGTACATTTCTGAATGTATGTTTTCCATAGCAATCTGG 111747 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347 || || || || || || ||||||| || || ||||| | |||||| ||| Sbjct 111746 AAGCCATAGAAACAGCGTGCTTCCGTTACCTGTACTTCTTGGCTGAATCGCTCC 111693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517405319265120