Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq15322 120 2e-22 >seq15322 Length=929654 Score = 120 bits (132), Expect = 2e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| |||||| | || | || |||||||| || || || ||||||||||| Sbjct 719400 GTGACATGGGCAATCATATATGTGAGCAGTGAATAGCTGGCGATATTGAAAGGCACCCCC 719459 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 |||||||| || | ||||| ||||| ||||| || || || | |||| |||||| Sbjct 719460 AGTCCCATGTCTCCAGATCTCTGATACAACTGGCAAGACAGTTCACCATTTAGAACATAA 719519 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAG 97287 ||||| | || |||| || || ||||| |||||| || || ||||||| Sbjct 719520 AACTGGCACAGAGCATGGCAAGGAGGCAAAGCCATTAGTGAAATATCTAAG 719570 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||| |||||||| || ||||| ||||| ||||| || ||||| | || |||||| | Sbjct 730138 TATTCAGCTCCAAAGTGTCTCCACTGGAAACCATACACTGGTCCCAAATCCCCTTCTGTT 730197 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 || ||| |||||| | ||||| || | | |||||||| ||||||||||| | | Sbjct 730198 CTGTCAGTGAAACCTTGTTTATCCAAGAATTTACGTGATCCATTGGCATCCCAAATCTTC 730257 Query 97522 ACACCAGATGCTGCAAGCTCTTT 97544 || || ||| | |||||||| Sbjct 730258 ACTCCTTTTGCAGAGAGCTCTTT 730280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346692354091880