Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq15322 129 5e-25 >seq15322 Length=929654 Score = 129 bits (142), Expect = 5e-25 Identities = 124/159 (78%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 20399 TAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGT 20458 |||||||||||||||| || ||| || ||||| ||||| ||| ||| |||| ||| Sbjct 719556 TAATGGCTTTGCCTCCTTGCCATGCTCTGTGCCAGTTTTATGTTCTAAATGGTGAACTGT 719497 Query 20459 CGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAA 20518 | || || ||||||| |||| | || ||||||||||| || ||||||||||| || | Sbjct 719496 CTTGCCAGTTGTATCAGAGATCTGGAGACATGGGACTGGGGGTGCCTTTCAATATCGCCA 719437 Query 20519 GTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 | ||| | ||||| || ||||||||||| ||||| |||| Sbjct 719436 GCTATTCACTGCTCACATATATGATTGCCCATGTCACAG 719398 Score = 87.8 bits (96), Expect = 1e-12 Identities = 126/175 (72%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 20113 GGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGA 20172 || ||||||||| ||| ||||| | ||||||||| ||||||||| || ||||| Sbjct 730295 GGTTCAACAAATGCTAAAGAGCTCTCTGCAAAAGGAGTGAAGATTTGGGATGCCAATGGA 730236 Query 20173 TCTAAGCAATTTTTACACAGCAATGGATTTGACA-ACCGTCAAGAGGGGGATTTGGGTCC 20231 || |||| || | | | || ||| || || | ||| ||||||||||| || Sbjct 730235 TCACGTAAATTCTTGGATAAACAAGG-TTTCACTGACAGAACAGAAGGGGATTTGGGACC 730177 Query 20232 TGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACACA 20286 |||||||| || || |||||||| |||||||||||||| || ||||| ||| Sbjct 730176 AGTGTATGGTTTCCAGTGGAGACACTTTGGAGCTGAATACAAAGATATGAATACA 730122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399078506147380