Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq12452 93.3 4e-14 seq14676 91.5 1e-13 >seq12452 Length=479537 Score = 93.3 bits (102), Expect = 4e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 ||||||||| ||||| || || || || ||||| | ||| ||||||| || | || | Sbjct 148884 CCTCATCTCGGCTAATGAGCTCATTGGAGAATGTCAGTCCAGGCATCAGACCCCTCTTCT 148943 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | | ||||||||| |||||||| || || || ||||| || || || ||||||||||| | Sbjct 148944 TCAGCCAAAATATAGCAGCAAAAGAACCTGAGAAGAAGATCCCTTCCACTGCAGCAAAGG 149003 Query 14014 C 14014 | Sbjct 149004 C 149004 >seq14676 Length=200364 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 13563 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13622 || || || || ||||| || || ||||| | |||| || |||||||||||||| || Sbjct 117164 TTTGACATTACTCCCATCTTCTGGTATTCTCCTACTCGCTTCTCAAAGAAGTTAGTCTTG 117105 Query 13623 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATT 13660 |||||||| || ||||| |||||||| ||||||||||| Sbjct 117104 CCTTCCAGCGAGATATTCTCCATAAAGTCAAATGGATT 117067 Score = 82.4 bits (90), Expect = 7e-11 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 14141 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14200 |||||| ||||| || || | || |||||||| || ||||||||||||||||| ||||| Sbjct 111807 AATGTAAGTATCTATGAGCAGACTGTACATTTCTGAATGTATGTTTTCCATAGCAATCTG 111748 Query 14201 AAAACCATAAAAGCATCTAGCTTCCG--ACCATTGTACTTC 14239 || ||||| || || | ||||||| ||| |||||||| Sbjct 111747 GAAGCCATAGAAACAGCGTGCTTCCGTTACC--TGTACTTC 111709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479597969725600