Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq16337 120 6e-22 seq14676 98.7 2e-15 >seq16337 Length=344012 Score = 120 bits (132), Expect = 6e-22 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062 |||| | ||||||||| ||||| ||||||||||| |||||||||||||| | |||| Sbjct 241644 ACCCGTTTCATGAAGAGATCGGGAATCCAGAGGGCAAAGAAGAGGTCCCTGGCTCGCTGC 241703 Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122 || ||| ||||||||||||| |||| || | ||| ||||| | ||| | ||||| ||| Sbjct 241704 TCCTCCTTGCCAGTGTTCTTCTTCAGGTCAAGAAACTCAAAAATGTCCAAATGCCATGGC 241763 Query 245123 TCCATGTAGACAGCGAGGGCGCCGGG 245148 || | ||||| || | ||| ||||| Sbjct 241764 TCAAGGTAGATGGCAAAGGCCCCGGG 241789 Score = 93.3 bits (102), Expect = 8e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 244704 CCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGG 244763 ||||||| || | ||||||||| || || || ||||| ||||| ||||||||||||| Sbjct 239896 CCACCTCGTCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCACTTGATGG 239955 Query 244764 TGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCC 244823 | ||||||| ||| || ||| || || || | ||||||||| |||||| | || Sbjct 239956 TTCCCAGGTTCTGCTGGTTGCTTTTCCTATTACAAGAGTCCTTGTACAGCATGTAAGGGG 240015 Query 244824 CCCCGGTCTCG 244834 |||||||||| Sbjct 240016 TCCCGGTCTCG 240026 >seq14676 Length=200364 Score = 98.7 bits (108), Expect = 2e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 ||||| ||| | || || || || || |||||||| ||| |||| || |||||||| ||| Sbjct 115050 GTAGCTTTTGCAGCAGTGGAAGGAATTTTCTTCTCTGGCTCCTTTGCATCCATCTTTTGG 115109 Query 42768 CTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGAC 42827 | ||| ||| | || ||||| |||||||| || || || |||||||||||||| || Sbjct 115110 TTGAAGAAGAGAGGGTTAATGCCTGGACTCACTTTTTCTAATGAACTCATCAGCAGAGAT 115169 Query 42828 GAGG 42831 |||| Sbjct 115170 GAGG 115173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944083236859840