Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq8042 84.2 2e-11 >seq8042 Length=21531 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/86 (85%), Gaps = 6/86 (7%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC--TGAGTAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| |||| || | |||||| Sbjct 15446 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAGGTTGAGC--GACCAAAGGAA 15389 Query 115587 CCAAAACTGATATATTGAGCCATTCG 115612 ||| ||||||| || ||||||||||| Sbjct 15388 CCATAACTGATTTAATGAGCCATTCG 15363 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/86 (85%), Gaps = 6/86 (7%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC--TGAGTAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| |||| || | |||||| Sbjct 15446 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAGGTTGAGC--GACCAAAGGAA 15389 Query 114390 CCAAAACTGATATATTGAGCCATTCG 114415 ||| ||||||| || ||||||||||| Sbjct 15388 CCATAACTGATTTAATGAGCCATTCG 15363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396957466830568