Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq6964 221 2e-52 seq9029 194 2e-44 seq7219 96.9 4e-15 >seq6964 Length=234560 Score = 221 bits (244), Expect = 2e-52 Identities = 744/1148 (65%), Gaps = 18/1148 (2%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 || ||| | | |||||| || || || | || || || ||||| ||||| |||||||| Sbjct 35593 TCCCCCATGAGGATGGCAGCCTGCACTGCGGCGCCATAAGCGACGGCCTCGTCGGGGTTG 35534 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || || || || ||||| || | ||| || | | ||| || || ||| Sbjct 35533 ATGCTCTTGTTGAGCTCCTTGCCGTTGAAGAAGTCCTGCAAGAGCTTTTGGATCTTGGGG 35474 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || || || |||| ||||| || | | | || || | ||| | Sbjct 35473 ATGCGGGTGGAGCCGCCCACCAGCACGATCTCCTGGATCTGGCCCTTGTCTAGCTTGGCA 35414 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || | || || || || |||| ||||| | ||| || ||| Sbjct 35413 TCGCGCAGGGCCTTCTCCACGGGCTCCAAGGTGCCGCGGAAGAGGTCGGCGTTGAGCTCC 35354 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || || ||||| ||||| || ||||| || | ||| ||| | | ||| || || Sbjct 35353 TCGAAGCGGGCGCGGGTGATGGAAGTGTAGAAGTCGATGCCCTCGAACAGCGAGTCGATC 35294 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||| | | || | | || | ||| ||||| || ||||| || || || || Sbjct 35293 TCGATGCTAGCCTGGGTGGAGGAGCTCAGCGTGCGCTTGGCCCGCTCGCAGGCAGTGCGC 35234 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | || || | || ||| ||| | | || || ||| || || || || ||||| Sbjct 35233 AGCCGCCGCACCGCCCGCTTGTTGCTGCCGATGTCCCGCTTGTGCTTGCGCTTGAACTCC 35174 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 || |||||| | | | | || || || || || |||| ||| || ||||| Sbjct 35173 TCCACGAAGTGGCTCACCATGCGGTTGTCAAAGTCCTCGCCGCCCAGGTGGGTGTCCCCG 35114 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 || || | || || || ||||| || | || ||| | | | || || || || || Sbjct 35113 GCCGTGGACTTCACCTCGAAGATGCCGTCCTCGATGGTGAGGATGGAGACGTCGAAGGTG 35054 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTATCG 7603 || || |||| ||| || ||||| |||||| | ||| || | | ||||| || Sbjct 35053 CCGCCGCCCAAGTCGAAGATGAGCACGTTCTTCTCGCCGGCCCCGGTGCCTTTCTTGTCC 34994 Query 7604 AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCA 7663 || ||||| ||||| || |||||||| || || || || ||||| || ||| ||||| Sbjct 34993 AGCCCGTAGGCGATGGCGGCCGCCGTGGGCTCGTTGATGATACGGAGCACGTTGAGGCCG 34934 Query 7664 GCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACC 7723 | || || | || ||||| || || || || || || ||||| |||||||| || || Sbjct 34933 GTGATGGTGCCGGCGTCTTTGGTGGCCTGGCGCTGGGAGTCGTTGAAGTAGGCGGGCACG 34874 Query 7724 GTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTG 7783 || | ||| |||| | || || || || || | |||||||| || ||||| ||| Sbjct 34873 GTGATGACGGCGTTCTGCACCTTGCGGCCCAGGTAGGCCTCCGCGATCTCCTTCATCTTG 34814 Query 7784 GTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTT-TCACCGTTAAAATC 7842 || || ||||| || ||||| || | | | | || | ||| || || || | || Sbjct 34813 GTGAGCACCATGGAGCTGATCTCCTCGGG-GAAGAAGGTCTTGTTCTCGCCCTTGTACTC 34755 Query 7843 AACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCAT 7902 || | | | |||| || |||| | || | || | | ||| | ||||| Sbjct 34754 CACCTGCACCTTGGGCTTG-CCGC--CCTCGCTCACCACGCGGAAGGGCCAGTGCTTCAT 34698 Query 7903 ATCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAA 7961 ||| || ||| || | ||| |||| | ||||| || ||||| || || || | Sbjct 34697 GTCGGACTGCACC-GTGGTGTCGTCGTACTTCCGGCCGATGAGGCGCTTGGCGTCGAAGA 34639 Query 7962 CTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCAT 8021 ||||| ||||||||||||| |||||||| || ||||||||||| || || || Sbjct 34638 TGGTGTTGGTGGGGTTCATGGCGACCTGGTTCTTGGCGGCGTCCCCGATGAGGCGCTC-- 34581 Query 8022 TATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTCCCTTGGTCGTTCGCAATA 8080 | || || || || || || | |||| || || || || || |||||||| || || Sbjct 34580 -GGTGTCGGTGAAGGCCACATA-GCTGGGCGTGGTGCGGTTGCCCTGGTCGTTGGCGATG 34523 Query 8081 ATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATA 8140 || || || | ||| ||| ||||||| ||||| || ||||| || || | || || Sbjct 34522 ATCTCGACCTTGCCGTGTTGAAAGACGCCCACGCAGGAGTACGTGGTGCCCAGGTCGATG 34463 Query 8141 CCGATTGC 8148 || || || Sbjct 34462 CCAATAGC 34455 >seq9029 Length=2188355 Score = 194 bits (214), Expect = 2e-44 Identities = 367/540 (68%), Gaps = 0/540 (0%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | |||||||| ||||| || || || Sbjct 975473 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTATTCAGCTCTTTGCCATTGAAG 975414 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | || || ||||| || |||||||| || || ||||| |||| || || Sbjct 975413 AAATCCTGCAGCAGTTTCTGAATCTTGGGGATTCGGGTAGACCCACCAACCAGTACAATA 975354 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | ||||| || | || | || || || | || || || || |||| | Sbjct 975353 TCATGGATCTGTGATTTGTCTAGTTTGGCATCCCGCAGGGCCTTCTCCACGGGATCCAGA 975294 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 ||||||||| || | | || |||||||| || | |||||| || || || Sbjct 975293 GTGCCACGGAACAAATCAGCATTTAACTCTTCAAAACGAGCTCTGGTAATTGAGGTGTAA 975234 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 ||||||| ||| || || | || ||||| ||||| | | || | | || || | Sbjct 975233 AAATCAATGCCCTCATAGAGAGAGTCAATCTCAATACTGGCCTGAGTGCTAGAGGAGAGG 975174 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| || ||||| ||||| || | ||| |||| || | | ||| | | | Sbjct 975173 GTACGCTTTGCACGTTCACAAGCCGTGCGGAGACGGCGAACTGCTCTCTTGTTCTCAGTA 975114 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || || ||||| || ||||| || || || || ||| || | | | ||| Sbjct 975113 ATGTCCTTCTTGTGCTTACGCTTGAATTCAGCAATGAAATGGTTGACCATACGGTTATCA 975054 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || || || ||||||||||| ||||| || || || | || ||||||||||| || | Sbjct 975053 AAGTCCTCCCCACCCAAGTGGGTATCACCTGCAGTTGACTTTACTTCAAAGATGCCATCC 974994 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 ||||| | | | |||||||||||| || |||||||| |||||||| || || || ||| Sbjct 974993 TCAATAGTGAGGATCGAAACATCAAAAGTGCCACCACCAAGGTCAAAGATAAGGACATTC 974934 >seq7219 Length=254049 Score = 96.9 bits (106), Expect = 4e-15 Identities = 747/1194 (63%), Gaps = 28/1194 (2%) Strand=Plus/Plus Query 6953 CCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTC--GTTCCCTT 7010 || |||||||| || |||||||||| || | || || ||| ||||| | | || | Sbjct 63204 CCCAGAGACAGCGGGGTCACGTCCAGAAGGAGCACGTTTTG--CAGATCCTGGGACCTGT 63261 Query 7011 CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAA 7070 || || |||||||| || || || | ||||||||| || || ||||| || ||||| | Sbjct 63262 TGCCTGTCAAGATGGCCGCCTGCACAGCCGCCCCGTAGGCCACGGCCTCGTCTGGGTTGA 63321 Query 7071 TCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGA 7130 || | || ||||||| || | || | ||| | || || | ||| |||| Sbjct 63322 TCTTCTTGCTCAGTTCCCGCCCACTGAAGAACTCCTGCAGCAGCGTCTGGACTTTGGGGA 63381 Query 7131 TTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT--TTATCGATCTTTGA 7188 | || || || || || |||| ||||| |||| | | ||| || | || || | Sbjct 63382 TGCGGGTTGAGCCTCCCACCAGCACGATGTCATGGATCT--GATCCTTGTTCATGTTGGC 63439 Query 7189 GTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTAC-GGAACAAGTCCATACACAGTT 7247 ||| || || | || | | || | | | | | |||| | ||| ||||| | Sbjct 63440 GTCCCGCAGCGCCTTCCCTAAGGGCTTTA-AGGTGGCCTGGAAGAGGTCGGAGCACAGGT 63498 Query 7248 CCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAA 7307 |||| || || || ||||| | || || | |||||| || || | ||| | || |||| Sbjct 63499 CCTCGAAGCGAGCCCGGGTGACGGTGGTGTGGAAATCCACCCCTTTGTACAGGGAGTCAA 63558 Query 7308 TTTCAATGGTTGTTT--GTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGT 7365 |||| | |||||| ||||| | ||| ||||| || | |||||| |||| Sbjct 63559 CGGAGATGGCGGCAGCGGTGCCG--GAAGAGAGCGTGCGCTTGGCCCTCTCACAAGCCGC 63616 Query 7366 TCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAA 7425 | || | | | ||| | || | | || | ||| ||||| | | || Sbjct 63617 CCTTAGCCTCTGCATGGCCTTCTTGTCCTGGCTGAGGTCCTCCTTGTGTTTCCTCCTGAA 63676 Query 7426 CTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATC 7485 ||| ||||| | || | |||||||| || || |||| ||| || || Sbjct 63677 CTCCCGCACCAAGTGATCCACCAGCCGGTTGTCGAAATCCTCCCCGCCCAGGTGGGTGTC 63736 Query 7486 CCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAA 7545 |||||| || || || || || ||||| || | || | | | || || || || Sbjct 63737 CCCCGCCGTGGCCTTCACCTCGAAGATGCCGTCGTCCACCCCGAGGATGGACACGTCGAA 63796 Query 7546 CGTACCACCACCCAGGTCAAAAATGAGTACGTT---CGTATCGTCGTCTTTGTTCTTA-- 7600 || || || |||||||| || ||||| | ||| | | | || ||||| | Sbjct 63797 GGTGCCGCCGCCCAGGTCGAAGATGAGGATGTTGCGCTTCCCTTCCCCTTTGCGGCTGGC 63856 Query 7601 -TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 || || ||||| || || ||||| ||||| || ||||| | || || || || Sbjct 63857 TTCCAGGCCGTAGGCAATGGCCGCTGCCGTGGGCTCATTGAGGATCTTCAGGACGTGGAG 63916 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 |||||| || || | |||||| | || || | || || || ||||| || ||||| || Sbjct 63917 GCCAGCGATCGTCCCAGCATCTATGGTGGCCCGGCGCTGGGAGTCGTTGAAATAGGCTGG 63976 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||||| | ||| || | |||| || || || | || || | | ||||| Sbjct 63977 CACCGTGATGACGGCCTGGGTGATGGGGCAGCCTAGGTAGGCCTCAGCCGTCTGCTTCAT 64036 Query 7780 TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT-TTCACCGTTAA 7838 |||| || || || | || ||||| |||| || ||| ||| || | || Sbjct 64037 CTTGGCGAGCACTATGGCGGAGATCTCCTCAGGGTAGAAGGCCTTCTCCTTCCCCTTGAA 64096 Query 7839 AATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTT 7898 || || || | || | || ||| | | || | |||| | | | ||| | Sbjct 64097 GGACACCTGCAC-CTTGAGCTTC-CCG--GTATCGCTCACCACCTGAAAGGGCCAGTGCC 64152 Query 7899 TCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAA 7958 || | || || ||| ||||| || | | | ||||| || ||||| ||||| | Sbjct 64153 TCGTGTCCAGCTGAACCATGGGGTCCTCAACCATCCGGCCGATCAGCCGCTTGGCATCGA 64212 Query 7959 AAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTT 8018 | || || || | |||||| | ||| | |||||||| || | |||||| | ||||| | Sbjct 64213 AGACGGTATTCTGGGGGTTGAGGGCCGCCTGGTTCTTGGCTGGGTCCCCCACCAGACGCT 64272 Query 8019 CATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAA 8078 | | | | || || || ||||| || || || || || ||||||||||| || | Sbjct 64273 CCGTGTCT---GTGAAAGCCACGTAACTGGGCGTGGTCCGGTTGCCTTGGTCGTTGGCGA 64329 Query 8079 TAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTA 8132 | || || || | ||| || ||||| || ||||| || || || || |||| Sbjct 64330 TGATCTCCACCTTGCCGTGCTGGCAGACCCCCACGCAGGAGTAGGTCGTGCCTA 64383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634960647254560