Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq9029 107 2e-17 >seq9029 Length=2188355 Score = 107 bits (118), Expect = 2e-17 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | || |||||||| || || |||||||| || || || || || Sbjct 974660 GTTACTAATGCTGTGGTCACAGTACCAGCCTACTTCAATGACTCCCAGCGCCAGGCCACA 974719 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||| || || ||||| || || || ||||||||||| || ||| Sbjct 974720 AAAGATGCTGGAACCATTGCAGGTCTCAATGTGCTCCGGATCATCAATGAACCGACAGCT 974779 Query 550511 GCTGCACTTGCATATGG 550527 ||||| |||| ||||| Sbjct 974780 GCTGCTATTGCTTATGG 974796 Score = 93.3 bits (102), Expect = 3e-13 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||||||| ||||||||||| | || |||| || || ||| Sbjct 973358 GGAATTGATCTTGGCACCACATATTCCTGTGTTGGTGTCTTCCAGCATGGCAAGGTGGAA 973417 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| |||||||| || || || ||| ||| | ||||| || || Sbjct 973418 ATCATTGCCAATGATCAGGGTAACAGGACCACGCCGAGTTACGTTGCCTTCACAGATACA 973477 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 || | |||| ||||| ||||| | |||| || |||||||| || || | Sbjct 973478 GAGAGGCTGATTGGCGATGCTGCAAAGAACCAAGTTGCTATGAATCCTACTAACACGGTC 973537 Query 550178 TTTG 550181 |||| Sbjct 973538 TTTG 973541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028149252285160