Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq14676 125 8e-24 >seq14676 Length=200364 Score = 125 bits (138), Expect = 8e-24 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 |||||||| || || | |||||||||||| || | ||| |||||||| ||||| || || Sbjct 115171 TCATCTCTGCTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAACCCTCTCTTCTTC 115112 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | |||||| || | |||||| || ||||| |||||||| ||||| ||||||||||| ||| Sbjct 115111 AACCAAAAGATGGATGCAAAGGAGCCAGAGAAGAAAATTCCTTCCACTGCTGCAAAAGCT 115052 Query 37320 ACAAGACGT 37328 || | |||| Sbjct 115051 ACTACACGT 115043 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||| |||||||| || || |||||||| ||||| | || || || || ||||| ||||| Sbjct 117159 CATTACTCCCATCTTCTGGTATTCTCCTACTCGCTTCTCAAAGAAGTTAGTCTTGCCTTC 117100 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATT 36964 || || ||||| |||||||| ||||||||||| Sbjct 117099 CAGCGAGATATTCTCCATAAAGTCAAATGGATT 117067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592156252531360