Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq16337 102 2e-16 seq12452 87.8 3e-12 >seq16337 Length=344012 Score = 102 bits (112), Expect = 2e-16 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091 |||| | ||||||||| || || ||||| || || ||||| || |||| |||||| Sbjct 241644 ACCCGTTTCATGAAGAGATCGGGAATCCAGAGGGCAAAGAAGAGGTCCCTGGCTCGCTGC 241703 Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151 |||||| ||| |||| ||| |||| || | ||||||||||||||| ||||| ||| Sbjct 241704 TCCTCCTTGCCAGTGTTCTTCTTCAGGTCAAGAAACTCAAAAATGTCCAAATGCCATGGC 241763 Query 222152 TCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 || || |||| ||| | || ||||||| || Sbjct 241764 TCAAGGTAGATGGCAAAGGCCCCGGGTCTCT 241794 >seq12452 Length=479537 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942 |||| ||||||||||| ||||| || ||||| ||| ||||| ||||| || || || | Sbjct 149009 TGGTTGCCTTTGCTGCAGTGGAAGGGATCTTCTTCTCAGGTTCTTTTGCTGCTATATTTT 148950 Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002 |||| ||| ||| ||| ||||| || ||| || ||||| |||||||| ||| | | Sbjct 148949 GGCTGAAGAAGAGGGGTCTGATGCCTGGACTGACATTCTCCAATGAGCTCATTAGCCGAG 148890 Query 26003 ACGAGG 26008 | |||| Sbjct 148889 ATGAGG 148884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928593036616960