Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq12666 91.5 2e-13 seq3578 91.5 2e-13 >seq12666 Length=127050 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 ||||||| ||||| | ||||| ||||| || ||||| ||||||| | |||||||| | Sbjct 73666 CACCATATGGAGATCTGGGATAAAAAGGGGTAGTCTCCTTCTGTGGTATTTCTTGCACTT 73607 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 | ||||||||||||||||| || ||||| |||| Sbjct 73606 TCCCATAAAGTTCACTGGTTGAGGCTTGGTAGA 73574 >seq3578 Length=24664 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 ||||||| ||||| | ||||| ||||| || ||||| ||||||| | |||||||| | Sbjct 7832 CACCATATGGAGATCTGGGATAAAAAGGGGTAGTCTCCTTCTGTGGTATTTCTTGCACTT 7773 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 | ||||||||||||||||| || ||||| |||| Sbjct 7772 TCCCATAAAGTTCACTGGTTGAGGCTTGGTAGA 7740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665314017742880