Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020
16-09-20] 21,684 sequences; 2,439,754,582 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq19244 113 1e-21
seq18073 113 1e-21
seq7215 113 1e-21
seq6328 113 1e-21
seq6280 113 1e-21
seq9264 104 7e-19
seq3649 104 7e-19
seq13130 100 9e-18
seq10790 100 9e-18
seq4321 98.7 3e-17
seq1740 98.7 3e-17
seq8062 96.9 1e-16
seq5971 96.9 1e-16
seq865 96.9 1e-16
seq11933 93.3 1e-15
seq10708 91.5 5e-15
seq18069 89.7 2e-14
seq15817 89.7 2e-14
seq10756 89.7 2e-14
seq13158 87.8 6e-14
seq15819 82.4 2e-12
seq15091 82.4 2e-12
seq10581 80.6 8e-12
seq20610 78.8 3e-11
>seq19244
Length=277429
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 51541 GCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 51482
Query 2829 CCGGGCTTCAGC 2840
|| ||||| |||
Sbjct 51481 CCAGGCTTTAGC 51470
Score = 113 bits (124), Expect = 1e-21
Identities = 67/70 (96%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 140711 GCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 140770
Query 2829 CCGGGCTTCA 2838
|| |||||||
Sbjct 140771 CCAGGCTTCA 140780
Score = 107 bits (118), Expect = 6e-20
Identities = 67/72 (93%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |
Sbjct 38659 GCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAAATCTAAAGGTCCCTGGTTCAATC 38718
Query 2829 CCGGGCTTCAGC 2840
|| ||||| |||
Sbjct 38719 CCAGGCTTTAGC 38730
>seq18073
Length=122226
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |
Sbjct 17202 GCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCTCTGGTTCAATC 17261
Query 2829 CCGGGCTTCAGC 2840
|||| |||||||
Sbjct 17262 CCGGACTTCAGC 17273
>seq7215
Length=111485
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |
Sbjct 54977 GCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCTCTGGTTCAATC 55036
Query 2829 CCGGGCTTCAGC 2840
|||| |||||||
Sbjct 55037 CCGGACTTCAGC 55048
Score = 80.6 bits (88), Expect = 8e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
||||| |||||||||| ||||||||||||||||||| ||||| |||||||| || ||| |
Sbjct 35245 AAGTAACTCAGTTGGGCGAGCATTAGACTGAAGATCCAAAGGGCCCTGGTTTAATCCCAG 35186
Query 2833 GCTT 2836
|||
Sbjct 35185 CCTT 35182
>seq6328
Length=16299
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |
Sbjct 8552 GCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCTCTGGTTCAATC 8493
Query 2829 CCGGGCTTCAGC 2840
|||| |||||||
Sbjct 8492 CCGGACTTCAGC 8481
>seq6280
Length=48815
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |
Sbjct 3191 GCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCTCTGGTTCAATC 3250
Query 2829 CCGGGCTTCAGC 2840
|||| |||||||
Sbjct 3251 CCGGACTTCAGC 3262
>seq9264
Length=124767
Score = 104 bits (114), Expect = 7e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |
Sbjct 114208 GCTGAAGTAGCTCAGTTGGGCAAGCATTAGACTGAAGCTCTAAATGTCCCTGGTTCAATC 114149
Query 2829 CCGGGCTTCAGC 2840
|| |||||||||
Sbjct 114148 CCAGGCTTCAGC 114137
>seq3649
Length=191651
Score = 104 bits (114), Expect = 7e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
Sbjct 71569 GCTGAAGTAGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTTAATC 71510
Query 2829 CCGGGCTTCAGC 2840
|| || ||||||
Sbjct 71509 CCAGGGTTCAGC 71498
Score = 80.6 bits (88), Expect = 8e-12
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||||||||||||| ||| | |||||||||||||||| |||| |||||||||| |
Sbjct 62601 GCTGAAGTAGCTCAGTCAGGAAACTGTTAGACTGAAGATCTAGAGGTACCTGGTTCAATC 62542
Query 2829 CCGGGCTTCAGC 2840
|| ||||| |||
Sbjct 62541 CCAGGCTTTAGC 62530
>seq13130
Length=273377
Score = 100 bits (110), Expect = 9e-18
Identities = 63/68 (93%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| |
Sbjct 47515 GCTGAAGTAGTTCAGTTGGGAAAGCATTAGACTGAAGGTCTAAAGGTCCCTGGTTCAATC 47456
Query 2829 CCGGGCTT 2836
|| |||||
Sbjct 47455 CCAGGCTT 47448
>seq10790
Length=1503029
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 354941 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 355000
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 355001 CCCGGGTTTCGGC 355013
>seq4321
Length=623732
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 555683 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 555624
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 555623 CCGGGTTTCGGC 555612
>seq1740
Length=420309
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 391220 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 391161
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 391160 CCGGGTTTCGGC 391149
>seq8062
Length=121886
Score = 96.9 bits (106), Expect = 1e-16
Identities = 62/68 (91%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |
Sbjct 101918 GCTGAAGTAGCTCAGTTGGGTGAGTGCTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 101859
Query 2829 CCGGGCTT 2836
|| |||||
Sbjct 101858 CCAGGCTT 101851
>seq5971
Length=189185
Score = 96.9 bits (106), Expect = 1e-16
Identities = 64/71 (90%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| |
Sbjct 139826 GCTGAAGTGACTCAGTTGGGAGAGCATTAGACTGAAAATCTAAAGGTCCCTGGGTCAATC 139885
Query 2829 CCGGGCTTCAG 2839
| |||||| ||
Sbjct 139886 CTGGGCTTTAG 139896
>seq865
Length=831568
Score = 96.9 bits (106), Expect = 1e-16
Identities = 64/70 (91%), Gaps = 2/70 (3%)
Strand=Plus/Plus
Query 2773 AAGTAGCTCAGTTGGGAGAGC--ATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCC 2830
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||
Sbjct 316596 AAGTAGCTCAGTTGGGAGAGCGCATTAGACTGAAAATCTAAAGGTCCCTGGTTCAATCCC 316655
Query 2831 GGGCTTCAGC 2840
||||| |||
Sbjct 316656 AGGCTTTAGC 316665
>seq11933
Length=402456
Score = 93.3 bits (102), Expect = 1e-15
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 2771 TGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCC 2830
||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct 67084 TGAAGTAACTCAGTCGGGAGAGCATTAGACTGAAAATCTAGAGGTCCCTGGTTCAATCCC 67025
Query 2831 GGGCTT 2836
|||||
Sbjct 67024 AGGCTT 67019
Score = 82.4 bits (90), Expect = 2e-12
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||||||||||||||||| |||||||||||||| ||||| || | ||||||||| |
Sbjct 199199 GCTGAAGTAGCTCAGTTGGGAAAGCATTAGACTGAAAATCTAGAGATTGCTGGTTCAATC 199258
Query 2829 CCGGGCTT 2836
|| ||||
Sbjct 199259 CCATGCTT 199266
>seq10708
Length=238332
Score = 91.5 bits (100), Expect = 5e-15
Identities = 61/68 (90%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||| |
Sbjct 43541 GCTGAAGTAGTTCAGTTGGGTGAGTGCTAGACTGAAGATCTACAGGTCCCTGGTTCAATC 43600
Query 2829 CCGGGCTT 2836
||||||||
Sbjct 43601 CCGGGCTT 43608
Score = 82.4 bits (90), Expect = 2e-12
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||||||||||||| |||||| |||| |||||||||||| ||||||||| ||||| |
Sbjct 23817 GCTGAAGTAGCTCAGTCAGGAGAGGATTATACTGAAGATCTAGAGGTCCCTGATTCAATC 23758
Query 2829 CCGGGCTT 2836
|| | |||
Sbjct 23757 CCAGTCTT 23750
>seq18069
Length=174772
Score = 89.7 bits (98), Expect = 2e-14
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||||| |||||| ||||||| ||||||||||||||||||| |||| |||||| |
Sbjct 106118 GCTGAAGTATCTCAGTGGGGAGAGTGTTAGACTGAAGATCTAAAGAGCCCTAGTTCAATC 106059
Query 2829 CCGGGCTTCAGC 2840
|| |||||||||
Sbjct 106058 CCAGGCTTCAGC 106047
Score = 80.6 bits (88), Expect = 8e-12
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825
|||||||||| |||||||||||||| ||||| |||||||||| ||| ||||||||||
Sbjct 14472 GCTGAAGTAGTTCAGTTGGGAGAGCGTTAGAGTGAAGATCTAGAGGGCCCTGGTTCA 14528
>seq15817
Length=127387
Score = 89.7 bits (98), Expect = 2e-14
Identities = 57/62 (92%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| |
Sbjct 84536 GCTGAAGTAGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAGAGGTCCCTGCTTCAATC 84477
Query 2829 CC 2830
||
Sbjct 84476 CC 84475
>seq10756
Length=190496
Score = 89.7 bits (98), Expect = 2e-14
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| |
Sbjct 146194 GCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTGGAGGTCACTGGTTCAATC 146135
Query 2829 CCGGGCTTCAGC 2840
||||| |||
Sbjct 146134 TTAGGCTTTAGC 146123
>seq13158
Length=154028
Score = 87.8 bits (96), Expect = 6e-14
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||
Sbjct 33238 AAGTAGCTCAGTTGGGAGAGCGTTAGATCGAAGATCTAGAGGTCCCTGGTTCAATCCCAA 33297
Query 2833 GCTTCAGC 2840
|||| |||
Sbjct 33298 GCTTTAGC 33305
Score = 87.8 bits (96), Expect = 6e-14
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||||||||||| | |||| ||| |||||||||||||||| || |||||||||||| |
Sbjct 147622 GCTGAAGTAGCTCACTCGGGAAAGCGTTAGACTGAAGATCTAGAGATCCCTGGTTCAATC 147563
Query 2829 CCGGGCTT 2836
|| |||||
Sbjct 147562 CCAGGCTT 147555
>seq15819
Length=238824
Score = 82.4 bits (90), Expect = 2e-12
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||||||||||||||||||||| |||||||||| |||| || ||||||||| || |
Sbjct 75448 GCTGAAGTAGCTCAGTTGGGAGAGTGTTAGACTGAAAATCTGGAGATCCCTGGTTTAATC 75389
Query 2829 CCGGGCTT 2836
|| |||||
Sbjct 75388 CCAGGCTT 75381
>seq15091
Length=133088
Score = 82.4 bits (90), Expect = 2e-12
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||||||||||||| ||| || ||||||||||||||||| ||||| ||||||||| |
Sbjct 14172 GCTGAAGTAGCTCAGTCAGGAAAGTATTAGACTGAAGATCTAGAGGTCTCTGGTTCAATC 14231
Query 2829 CCGGGCTT 2836
|| || ||
Sbjct 14232 CCAGGTTT 14239
>seq10581
Length=1121298
Score = 80.6 bits (88), Expect = 8e-12
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||||||||||||||||| ||| |||||||||| ||||||||||||||||| || |
Sbjct 822041 GCCGAAGTAGCTCAGTTGGGCGAGTGCTAGACTGAAGTTCTAAAGGTCCCTGGTTTAATC 822100
Query 2829 CCGGGCTTCAGC 2840
|| || | ||||
Sbjct 822101 CCAGGTTACAGC 822112
>seq20610
Length=414132
Score = 78.8 bits (86), Expect = 3e-11
Identities = 49/53 (92%), Gaps = 0/53 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821
||||||||||||||| ||||| |||||||||| |||||||| |||||||||||
Sbjct 206381 GCTGAAGTAGCTCAGATGGGACAGCATTAGACAGAAGATCTGAAGGTCCCTGG 206329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15845840970180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |