Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq20616 95.1 2e-14 seq8995 95.1 2e-14 >seq20616 Length=1301372 Score = 95.1 bits (104), Expect = 2e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 213995 CAGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTT 214054 ||||| ||||| || ||| | |||||||| || || ||||| | | | | ||| | Sbjct 792868 CAGATGATTGATGGAGAAATGTACCCTCCCACTGTGAAGGACACTCAGGCAGAAATGATC 792809 Query 214055 TACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTC 214114 ||| ||| ||||| | | | | || | | || || ||| ||||||| | Sbjct 792808 TACCCACCTCATGTTCCTAAGCACCTGCAATTTTCTGTAGGCAATGAGGTGTTTGGTTTG 792749 Query 214115 GTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGAC 214174 || || ||||| ||| |||| |||| || ||||| ||||||||||| |||| || ||| Sbjct 792748 GTCCCAGGTTTAATGATGTATGCCACAATATGGCTCAGAGAGCACAATCGGGTCTGTGAC 792689 Query 214175 GTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCA 214221 | || || || | ||| || |||||||| || || ||||| ||||| Sbjct 792688 ATCCTTAAGCAGGTGCATCCAGAATGGAATGATGAGCAGCTTTTCCA 792642 >seq8995 Length=201141 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 214092 TGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGA 214151 |||| | ||| ||||||| || |||| || | ||| |||| || | |||||||| Sbjct 24686 TGGGCCAGGAGGTGTTTGGCCTGCTGCCGGGGCTAATGATGTATGCGACCATCTGGCTTC 24627 Query 214152 GAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAAC 214211 | ||||||||| | || || ||||||||||| || ||||| ||| |||| |||||| | Sbjct 24626 GCGAGCACAACCGAGTCTGTGACGTGCTGAAGCAGGAGCATCCGACGTGGAGCGACGAGC 24567 Query 214212 AGCTGTTCCAGA 214223 |||| ||||||| Sbjct 24566 AGCTCTTCCAGA 24555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723144738476160