Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq15322 102 7e-17 >seq15322 Length=929654 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||| || ||||| || |||||||| | || || || || ||||| |||||||| | Sbjct 719402 GACATGGGCAATCATATATGTGAGCAGTGAATAGCTGGCGATATTGAAAGGCACCCCCAG 719461 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||||||||| |||| ||||| | |||||| ||||| || ||||| || || || Sbjct 719462 TCCCATGTCTCCAGATCTCTGATACAACTGGCAAGACAGTTCACCATTTAGAACATAAAA 719521 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAG 6771 ||||| || | ||||| || || | ||||| || Sbjct 719522 CTGGCACAGAGCATGGCAAGGAGGCAAAGCCATTAG 719557 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 34574 CTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTG 34633 || ||||| | || || ||||| | || ||||| || || || ||||| || ||| Sbjct 719557 CTAATGGCTTTGCCTCCTTGCCATGCTCTGTGCCAGTTTTATGTTCTAAATGGTGAACTG 719498 Query 34634 TCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCT 34693 || |||||| | ||||| |||| ||||||||||| | |||||||| ||||| || || Sbjct 719497 TCTTGCCAGTTGTATCAGAGATCTGGAGACATGGGACTGGGGGTGCCTTTCAATATCGCC 719438 Query 34694 AGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 || || | |||||||| || ||||| || |||||| Sbjct 719437 AGCTATTCACTGCTCACATATATGATTGCCCATGTC 719402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448140898476480