Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq14676 89.7 5e-13 seq15914 86.0 7e-12 seq4558 84.2 2e-11 >seq14676 Length=200364 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| || || || | |||||||||||| || | ||| |||||||| |||| || || Sbjct 115171 TCATCTCTGCTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAACCCTCTCTTCTTC 115112 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | |||||| || | ||||| || || || |||||||| || || || || ||||| || Sbjct 115111 AACCAAAAGATGGATGCAAAGGAGCCAGAGAAGAAAATTCCTTCCACTGCTGCAAAAGCT 115052 Query 23653 ACAAGACGT 23661 || | |||| Sbjct 115051 ACTACACGT 115043 >seq15914 Length=586958 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 8538 AACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCA 8597 ||| ||||| |||| |||||||||| ||||| || ||||||| |||||||||||||||| Sbjct 130354 AACCCCTGAGCTCAAGTGATCCACCAGCCTCAGCTTCCCAAATAGCTGGGATTACAGGCA 130295 Query 8598 TGAGCCACCGCGCCTGG 8614 ||||| |||||||| Sbjct 130294 CATGCCACTGCGCCTGG 130278 >seq4558 Length=327199 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 8537 GAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596 |||||||||| |||| | ||||| || ||||| ||||||||| ||| ||||||||||| Sbjct 41850 GAACTCCTGAGCTCAAGCGATCCGCCGGCCTCAGCCTCCCAAGTAGCTAGGATTACAGGC 41791 Query 8597 ATGAGCCACCGCGCCTGGC 8615 || ||||||||||| ||| Sbjct 41790 GTGCGCCACCGCGCCCGGC 41772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521346650677600