Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq7643 114 1e-20 seq22 86.0 6e-12 >seq7643 Length=26413 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||||||||| || || || || || | || ||||| ||||||||| | || || || | Sbjct 24354 AAAAATGCAGATCTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTAGAGGTGGAGCC 24413 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | || | | | | | | |||| || || | ||||| || ||||| || | || Sbjct 24414 AAGTGATACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGA 24473 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| || | || |||| || || || |||||||| || | |||||||| |||||| Sbjct 24474 CCAACAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCCGACTA 24533 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||||| |||| || ||||| || |||| ||||||| || Sbjct 24534 CAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGG 24584 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || ||||||||| | || || || ||| Sbjct 24586 ATGCAGATCTTCGTGAAGACCTTAACTGGGAAGACCATCACCCTGGAGGTGGAGCCCAGT 24645 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||| | ||||| | ||||| || ||||| || | || || Sbjct 24646 GACACCATTGAGAACG-TCAAAGCCAAAATCCAAGACAAGGAAGGCATTCCTCCTGATCA 24704 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || || || ||||| || || | |||||||| |||||||| Sbjct 24705 GCAGAGGTTGATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACCCTTTCTGACTACAA 24764 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| |||| || || || || |||| ||||||| ||| Sbjct 24765 CATCCAGAAGGAGTCCACTCTCCACCTTGTCCTGCGTCTGAGGGGTGGC 24813 >seq22 Length=1337131 Score = 86.0 bits (94), Expect = 6e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| || || || || || || ||| |||||||||| || ||| || |||||||||| Sbjct 639835 TGGTTGCGTTTGCTGCTGTAGAAGGCATCTTCTTTTCTGGTGCTTTTGCAGCCATATTTT 639776 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCAT 117153 |||||||||| | || | ||||| ||||| |||||| |||||| || || Sbjct 639775 GGCTCAAGAAGAGAGGGTTAATGCCAGGCCTTACTTTCTCCAACGAACTTAT 639724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513310319304240