Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1135 156 8e-33 seq7593 87.8 3e-12 >seq1135 Length=474297 Score = 156 bits (172), Expect = 8e-33 Identities = 137/171 (80%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 51885 GATAGCCAGAGCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGT 51944 |||||| |||| ||||||| |||||| ||||| |||||||| ||||| |||| || | Sbjct 61630 GATAGCAGGAGCTTTATGGTGGTACTACATATCAAAAGGGATTGAATATCTGGACACAAT 61689 Query 51945 ATTTTTCATACTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTT 52004 ||| ||||| || || || ||||||||||| | |||||||| || || ||||| ||||| Sbjct 61690 ATTCTTCATCCTAAGAAAGAAATTTAATCAAATCAGTTTTCTTCATGTCTATCACCATTT 61749 Query 52005 TACTATGTTTACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055 |||||||||||| || | ||||| || || |||||| |||| ||||| || Sbjct 61750 CACTATGTTTACTTTATGGTGGATTGGCATCAAATGGGTTGCAGGAGGACA 61800 Score = 105 bits (116), Expect = 1e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244 ||| ||||||||| | |||| || || || || ||||| ||||| || |||||||| || Sbjct 65442 GGTTCAGTTCCATGTGACTATTGGCCACACCGCCATGTCTATTTATATTGATTGCCCCTT 65501 Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304 ||| |||||||| || ||| || ||| ||||| || ||| || | |||||||| Sbjct 65502 TCCTAAATGGATGCACTGGGGTGTCATTTTCTATGCTGCCTCTTTTATTGTTCTGTTTGG 65561 Query 52305 TAACTTCTATTTTAGAACATACAAGA 52330 ||||||||| | | | |||||||||| Sbjct 65562 TAACTTCTACTATCGGACATACAAGA 65587 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 ||||||||||||||||| | ||| |||| || |||||| |||||||| || ||||| Sbjct 63801 GCATTTTTTGGAGCTCATATGAATGCTTTAATTCATGTTGTTATGTACCTGTACTATGGA 63860 Query 52117 ATGGCCGCTTGTGGTCCTATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTATA 52176 | || || ||||| || | |||| || || || ||||||||||| || | || ||| Sbjct 63861 CTAGCTGCCTGTGGCCCAAAGTTCCACAAATACCTTTGGTGGAAACGGTACTTGACCATA 63920 Query 52177 ATGCAGTTGGTA 52188 ||||| || ||| Sbjct 63921 ATGCAATTAGTA 63932 >seq7593 Length=55036 Score = 87.8 bits (96), Expect = 3e-12 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 189470 CAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATA 189529 |||||||| ||||| || |||||| | || | || ||||||||||| |||||||| Sbjct 14548 CAGATGGTTCACGAAGGGAAGATGCATGGCTTCCTGCGGATGTATTGGGCCAAGAAGATT 14607 Query 189530 CTTGAATGGACTAGAACACCTGAAGACGCTTTG-AGTTATAGTATCTATTTGAACAACAA 189588 | || ||||| || |||| || || || || |||| ||| ||||| |||| || Sbjct 14608 TTGGAGTGGACCAGGTCACCCGAGGAGGCCCTGCAGTT-TAGCATCTACCTGAATGACCG 14666 Query 189589 GTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGT 189628 |||||| | |||||| || || ||||| ||||||||| Sbjct 14667 CTACGAATTGGACGGCCGAGACCCCAACGGTTACGTAGGT 14706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919776367395960