Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq6438 107 2e-18 seq2976 98.7 1e-15 seq1780 98.7 1e-15 seq732 98.7 1e-15 seq1775 96.9 4e-15 seq481 96.9 4e-15 seq12261 95.1 1e-14 seq7643 95.1 1e-14 seq40285 91.5 2e-13 >seq6438 Length=36418 Score = 107 bits (118), Expect = 2e-18 Identities = 75/85 (88%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 60056 GAAAAATTT---TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 ||||||||| ||||| || | ||||||||||||| ||||||||||||||||||||| Sbjct 7448 GAAAAATTTCACTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 7507 Query 60113 ATACTCACCACTATACTACCGAGGA 60137 |||||||||||||||||| |||||| Sbjct 7508 ATACTCACCACTATACTAACGAGGA 7532 >seq2976 Length=375034 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 128084 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 128143 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 128144 TATACTAACGAGGA 128157 >seq1780 Length=167991 Score = 98.7 bits (108), Expect = 1e-15 Identities = 73/85 (86%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 60056 GAAAAATTT---TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 ||||||| | ||||| || | ||||||||||||| ||||||||||||||||||||| Sbjct 8299 GAAAAATCTGCATCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 8358 Query 60113 ATACTCACCACTATACTACCGAGGA 60137 ||||| |||||||||||| |||||| Sbjct 8359 ATACTTACCACTATACTAACGAGGA 8383 >seq732 Length=637555 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 632155 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 632214 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 632215 TACTAACGAGGA 632226 >seq1775 Length=152888 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 151349 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 151290 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 151289 ATACTAACGAGGA 151277 >seq481 Length=401036 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 74938 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 74997 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 74998 ATACTAACGAGGA 75010 >seq12261 Length=14962 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 10417 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 10358 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 10357 TACTAACGAGGA 10346 >seq7643 Length=26413 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| |||| || || || | || ||||||||||| ||||| || Sbjct 24777 CTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAA 24718 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | |||||| || | || | || |||||||| |||||| ||||| | Sbjct 24717 GATCAACCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGGATTTTGGCTTTGACGTT 24658 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| || | ||||| || | |||||||| || || |||| ||||| || Sbjct 24657 CTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTTAAGGTCTTCAC 24598 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 24597 GAAGATCTGCAT 24586 >seq40285 Length=966 Score = 91.5 bits (100), Expect = 2e-13 Identities = 69/81 (85%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 60056 GAAAAATTT---TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 |||||| || ||||| || | ||||||||||||| ||||||||||||||||||||| Sbjct 81 GAAAAACTTGAGTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 22 Query 60113 ATACTCACCACTATACTACCG 60133 ||||| |||||||||||| || Sbjct 21 ATACTTACCACTATACTAACG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569699022939720