Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq2566 118 1e-21 seq22 105 6e-18 >seq2566 Length=113286 Score = 118 bits (130), Expect = 1e-21 Identities = 109/138 (79%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 16243 ATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCAT 16302 |||| | || || | || || ||||| || | ||| || ||||| ||||| || ||||| Sbjct 13205 ATCAATAAGCCATACCTCATCTCTACTGATCAGCTCATTAGAAAAAGTAAGCCCAGGCAT 13146 Query 16303 TAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTC 16362 ||| |||||||| || | ||||||||| | ||||| || ||||||||||| || ||||| Sbjct 13145 TAGACCTCGTTTCTTCAGCCAAAATATTGACGCAAAAGAGCCAGAAAAGAAGATTCCTTC 13086 Query 16363 AACTGCGGCAAATGCAAC 16380 |||||| |||||||| || Sbjct 13085 AACTGCAGCAAATGCTAC 13068 Score = 102 bits (112), Expect = 8e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 16504 AATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTG 16563 ||| |||||||| || |||||||||||||||||||||||||| |||||||| || ||||| Sbjct 11687 AATGTAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGTTCTCCATGGCAATCTG 11628 Query 16564 AAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTC 16602 || ||||| || || | ||||| | || ||||| ||| Sbjct 11627 GAAGCCATAGAAACAGCGTGCTTCTGTTACTTGTATTTC 11589 Score = 82.4 bits (90), Expect = 7e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 15884 CTTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATT 15943 ||||| ||||| ||| | || ||| | |||||| | |||||| || ||| Sbjct 14716 CTTTAGAAATCTGCATCCAAAGTAAATGCGTTATCTGCAGGACGTGACATCACACCCATC 14657 Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 |||||||||| | || | ||||||||||||||| || || ||||| | || ||||| Sbjct 14656 CTTTGATATTCTCCTACACGCTTTTCAAAGAAATTAGTCTTGCCTTCCAGAGAGATATTC 14597 Query 16004 TCCATAAAATCAAAAGGATT 16023 |||||||| ||||| ||||| Sbjct 14596 TCCATAAAGTCAAATGGATT 14577 >seq22 Length=1337131 Score = 105 bits (116), Expect = 6e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 16257 CTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTT 16316 |||| || || || || | ||||| || || ||||| |||||||||| |||| || | Sbjct 639710 CTTCATCTCTGCTAATAAGTTCGTTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCT 639769 Query 16317 TAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATG 16376 | | ||||||||| || ||||| | |||||||||||| || ||||| || || ||||| | Sbjct 639770 TGAGCCAAAATATGGCTGCAAAAGCACCAGAAAAGAAGATGCCTTCTACAGCAGCAAACG 639829 Query 16377 CAACCAATCGCTCACC 16392 |||||| || ||||| Sbjct 639830 CAACCACTCTTTCACC 639845 Score = 102 bits (112), Expect = 8e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 15888 AAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTTTTT 15947 |||||||| ||||| || ||| | |||| ||| || |||||||||| | | || Sbjct 637307 AAAAATCAGCATCTAAAGTAAATATCTTATTATTTGCTTTGGACATAACTGCAAAATGTT 637366 Query 15948 GATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCA 16007 ||||||| ||| ||| | ||||||||||| ||||||||||| | ||||| || |||| Sbjct 637367 GATATTCTGAAACCCTCCTCTCAAAGAAATTCGTTTTTCCTTCCAGGGAAATGTTCTCCA 637426 Query 16008 TAAAATCAAAAGGATTTTTTG 16028 | || |||||||| |||| || Sbjct 637427 TGAAGTCAAAAGGGTTTTCTG 637447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460798398821400