Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq1593 471 3e-128 seq392 102 6e-17 >seq1593 Length=250849 Score = 471 bits (522), Expect = 3e-128 Identities = 715/1004 (71%), Gaps = 24/1004 (2%) Strand=Plus/Minus Query 107628 TACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGA--AG-TTCATACAG 107684 ||| | ||| |||||| || || || |||||| | |||||| || ||| | | Sbjct 87594 TACTTGAACCTAACCAAGGATTGCCAGACCTTCAAAG---AAAGGAGAAGATTCTTTGGG 87538 Query 107685 TTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAG 107744 |||| ||||| ||||| || | ||||||| ||||| || || |||||| |||||||| Sbjct 87537 TTCCACCTGAGCAAAGAGGAAGAAAACTTCCCTATTGCTTATTCCATGGTGATCCATGAG 87478 Query 107745 AAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGT 107804 |||||||| | || ||| || | || ||||| | | ||| ||||||||| |||||||| Sbjct 87477 AAGATTGAGATGTTCGAAAGGTTACTAAGAGCCATCTTTGCTCCTCAGAACGTATACTGT 87418 Query 107805 GTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCC 107864 ||||||||||| || || || || |||| || | || || ||| |||| | ||| Sbjct 87417 GTCCACGTGGACAGCAAATCTCCCAAGCTTTTCCAAAAAGCCGTTCAGGGCATTGTCTCC 87358 Query 107865 TGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCC 107924 |||||| |||||| || |||| |||| || ||||| |||||||| ||||| Sbjct 87357 TGCTTCGACAATGTTTTTCTGGCTTCTAAGCAGGAGAGCGTGGTGTATGCCTCTTGGTCG 87298 Query 107925 AGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAG 107984 || || ||||||||||||||||| ||| | ||| |||| || ||| |||| |||| | Sbjct 87297 AGGGTCCAAGCTGACCTGAACTGCATGAAGGACCTGCTTCAAAGCAAGGTGCGTTGGAGG 87238 Query 107985 TACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTG 108044 ||| | ||||| || || ||||| || ||||| || ||||| || ||||| |||| Sbjct 87237 TACCTCCTGAACACCTGTGGGACCGATTTCCCAATCAAGACAAACAGAGAGATCGTCCAA 87178 Query 108045 GCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaa 108104 ||||| || || |||| || || |||| ||||| |||||| |||||| |||||| | Sbjct 87177 GCCCTAAAACTGCTGAACGGGAAAAACAACATGGAATCTGAGAAACCTTC--AGTCCACA 87120 Query 108105 aaa--aaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGA 108162 ||| || ||||||||||||| ||| | ||||| ||| | | ||||| | || Sbjct 87119 AAAGAAACCGCTGGAAATACCACTACAAAGTGACCAACAGCATCATTCAGACCAGGATGA 87060 Query 108163 TGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCT 108222 ||| |||||| || | | | ||||||||||| || |||||||| | |||| | Sbjct 87059 CCAAGAGCCCTCCTCCCCAAAGCTCCCCCATGTTCACTGGCAATGCCTACATCGTGGTCA 87000 Query 108223 CTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAG-ACTGGTTGAA-TG 108280 | | | |||||||| ||| |||| | |||| ||| ||| | || | | || || Sbjct 86999 CCAGGGAGTTTGTCCAGCATCTCTTCAAGGACCC--AATGGCAAGGCGCTTGATCAAGTG 86942 Query 108281 GGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCA--GCGTGCTCCG 108338 | |||||||||||| |||||||| ||||| |||||||| ||| | || || ||| | | Sbjct 86941 GTGCAAAGACACCTACAGCCCCGATGAACATCTCTGGGCTACCTTGCATCGCATGC-CAG 86883 Query 108339 TGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATC 108398 || |||||||||| || ||| | |||| | | || ||||||||| ||||||| Sbjct 86882 AGG-TGCCTGGCTCGGTCCCTTTTAATGAAAAGTTTGATCTCACAGACATGAATGCCATC 86824 Query 108399 GCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCA 108458 ||| || | || |||||| ||| ||| || || |||||| ||| || |||| || Sbjct 86823 GCCCGGGTGGTGAAGTGGGCCTACAGCGAAGGGGACATCAGCAAGGGAGCCACTTACCCA 86764 Query 108459 CCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGG 108518 | || ||||| | | | | |||| |||| | || || |||||||| ||||| Sbjct 86763 CAGTGTACTGGAGTTTACCAGCGGGCAGTCTGTGTCTATGGACTTGGGGACCTCCACTGG 86704 Query 108519 ATTCT---CCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAAC 108575 | || |||| || ||||| | || |||||||| ||||| || |||||||| || Sbjct 86703 CTGCTGTCCCAG---CACCACCTGCTCGCCAACAAGTTCGACCCCAGCGTGGATGAGTAC 86647 Query 108576 GTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTA 108619 ||| | |||||| | ||||||||||| || || ||||||||||| Sbjct 86646 GTCATCCAGTGCCTGGAAGAGTACCTGCGCCACAAGGCCATCTA 86603 >seq392 Length=717314 Score = 102 bits (112), Expect = 6e-17 Identities = 224/333 (67%), Gaps = 2/333 (1%) Strand=Plus/Plus Query 107698 AAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACT 107757 ||||||| ||| || |||||||| || || || |||| ||| | || ||| | | Sbjct 23365 AAGAAGAAGCAGAATTTCCCATTGCATATTCAATTGTGGCTCATCATAAAATTAATATGC 23424 Query 107758 TTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATG 107817 |||| | || ||| || || | || || ||||| ||| ||||| | || || || Sbjct 23425 TTGAGAGACTTCTGAGAACCATATACGCTCCTCAAAACTATTACTGCATTCATGTTGACA 23484 Query 107818 TGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATG 107877 |||||||||||| ||||| | || || || | ||| || || || | ||||| Sbjct 23485 AAAAGTCCCCAGAGTCTTTCTTGGCAGCTGTAAAAGGGATTGCATCATGTTTTCACAATG 23544 Query 107878 TCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTG 107937 ||||||| ||||| | |||| || || ||||| || ||| | | || ||||||| Sbjct 23545 TCTTCATTGCCAGCCAATTGGAAAGTGTAGTGTATGCATCATGGAGCCGGGTACAAGCTG 23604 Query 107938 ACCTGAACTGTATGGAAGACTTGCTCCA-GAGCTCAGTGCCATGGAAGTACTTACTGAAT 107996 |||| ||||| || |||| | || || ||| || ||||||||||| | ||| Sbjct 23605 ACCTCAACTGCAT-GAAGGATCTCTGCAGGAGGAATGTTAGCTGGAAGTACTTGATCAAT 23663 Query 107997 ACATGCGGGACAGACTTCCCCATAAAGACCAAT 108029 || || | || ||||| || ||||| ||| Sbjct 23664 CTCTGTGGCATGGATTTCCCAATCAAGACAAAT 23696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347010726738126