Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq7643 120 2e-22 >seq7643 Length=26413 Score = 120 bits (132), Expect = 2e-22 Identities = 154/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||||||| || ||| | || |||| Sbjct 24565 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCCA 24506 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || ||||| || || |||| || ||||||||| ||||| | || ||||||||| | Sbjct 24505 GCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGGA 24446 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | | | || | ||||||||| | ||| || ||||||| Sbjct 24445 TCTTGGCCTTCACATTCTCAATGGTATCACTTGGCTCCACCTCTAGGGTGATGGTCTTGC 24386 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 | |||| ||||||||||||||| ||||| || Sbjct 24385 CAGTCAAAGTCTTCACAAAGATCTGCATTTT 24355 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | || | ||| || ||| ||||||||| ||||||||||| Sbjct 24813 GCCACCCCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 24754 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || || || || ||||| || || ||||||| ||| || || ||||| Sbjct 24753 AAGGGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGAGG 24694 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || |||||||| ||||| || || | | | | |||| | |||||| Sbjct 24693 AATGCCTTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCCAC 24634 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| ||| || ||||| || || | |||||||| ||||| ||||| Sbjct 24633 CTCCAGGGTGATGGTCTTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393648045039379