Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq2566 114 2e-20 seq22 102 1e-16 >seq2566 Length=113286 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| |||||||| || | || |||||||| || || || |||||||| || || || | Sbjct 13191 CCTCATCTCTACTGATCAGCTCATTAGAAAAAGTAAGCCCAGGCATTAGACCTCGTTTCT 13132 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||||||||| || || || || || ||||||||||||||||| ||||||||||| | Sbjct 13131 TCAGCCAAAATATTGACGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATG 13072 Query 33724 C 33724 | Sbjct 13071 C 13071 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 34079 CACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATG 34138 ||| ||||| ||||||| ||||| |||||||| || || ||||| | |||||||||||| Sbjct 8277 CACCTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATG 8218 Query 34139 ATATTGGATTGGGAAAATAACAAA 34162 ||||| || || ||||| ||||| Sbjct 8217 GTATTGAATAGGAAAAATGACAAA 8194 Score = 82.4 bits (90), Expect = 1e-10 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 33833 TTCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33892 ||| ||| ||| |||| |||||||| || | | |||||||||||| ||||||||||| Sbjct 11702 TTCTTTAGAATCCTTAATGTAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGTT 11643 Query 33893 TTCAATGGCCATCTGAAATCCGTAGAAACA 33922 || ||||| ||||| || || |||||||| Sbjct 11642 CTCCATGGCAATCTGGAAGCCATAGAAACA 11613 >seq22 Length=1337131 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || ||||| ||||| | |||||| || || || || || ||||||| || | ||| || Sbjct 639712 TCATCTCTGCTAATAAGTTCGTTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCTTG 639771 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33725 ||||||||||||| || || | || ||||||||||| |||||||| |||||||| ||| Sbjct 639772 AGCCAAAATATGGCTGCAAAAGCACCAGAAAAGAAGATGCCTTCTACAGCAGCAAACGCA 639831 Query 33726 ATAAGTCTCTCTCC 33739 | | ||| || || Sbjct 639832 ACCACTCTTTCACC 639845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627484133664720