Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq2566 114 2e-20 seq22 107 3e-18 seq1894 105 9e-18 >seq2566 Length=113286 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| |||||||| || | || || ||||| || || || |||||||| || || || | Sbjct 13191 CCTCATCTCTACTGATCAGCTCATTAGAAAAAGTAAGCCCAGGCATTAGACCTCGTTTCT 13132 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||||||||| |||||||| || ||||||||||| |||||||| ||||| ||||| | Sbjct 13131 TCAGCCAAAATATTGACGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATG 13072 Query 36300 C 36300 | Sbjct 13071 C 13071 Score = 93.3 bits (102), Expect = 6e-14 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 36655 CACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATG 36714 ||| ||||| ||||||| ||||| |||||||| || || ||||| | |||||||||||| Sbjct 8277 CACCTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATG 8218 Query 36715 ATATTGAATTGGAAAAATAACAAA 36738 |||||||| |||||||| ||||| Sbjct 8217 GTATTGAATAGGAAAAATGACAAA 8194 >seq22 Length=1337131 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || ||||| ||||| | ||||||||| || || || || ||||||| || | ||| || Sbjct 639712 TCATCTCTGCTAATAAGTTCGTTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCTTG 639771 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 36301 ||||||||||||| ||||| | ||||||||||| || |||||||| || ||||| ||| Sbjct 639772 AGCCAAAATATGGCTGCAAAAGCACCAGAAAAGAAGATGCCTTCTACAGCAGCAAACGCA 639831 Query 36302 ATAAGTCTCTCTCC 36315 | | ||| || || Sbjct 639832 ACCACTCTTTCACC 639845 >seq1894 Length=199351 Score = 105 bits (116), Expect = 9e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 9227 TTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATC 9286 ||| || |||||| || |||| | | | | ||| ||||| |||||||||||||| || Sbjct 10684 TTACTTTTTATTAAATGCTTCTAGCAAACGGAGCAGGTGCAAAAACAGATTGATGATGTC 10625 Query 9287 CAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGA 9346 ||| || | |||||| | || | | ||| ||||| || ||||| || || |||| | Sbjct 10624 CAAATAAAGATTGATTGCAGCCAGTATATATTCTTCTGGAGAGAGTTTGTGCATTAATAG 10565 Query 9347 GTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAG 9406 || ||||||||||| || ||||| ||||| | ||| || || ||||| | ||||| Sbjct 10564 ATGAGTGTCATAGATGATAAATCCACAGAACAGAAGCGCTCCTGCAGCAGCAAATACCAG 10505 Query 9407 CTCCACTGTTTCACTTTGCACAAATA 9432 ||| | | |||| | | | ||||| Sbjct 10504 CTCTATTACTTCATTATTGAAAAATA 10479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655734278003160