Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq2566 120 3e-22 seq22 102 8e-17 >seq2566 Length=113286 Score = 120 bits (132), Expect = 3e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 ||||||||||||| || || || || ||||| || | || ||||| | |||||||| | Sbjct 13191 CCTCATCTCTACTGATCAGCTCATTAGAAAAAGTAAGCCCAGGCATTAGACCTCGTTTCT 13132 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | | ||||||||||| ||||| || || |||||||| ||||| |||||||||||||| | Sbjct 13131 TCAGCCAAAATATTGACGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATG 13072 Query 14014 CTATTAATCGTTCTCC 14029 ||| || ||||| || Sbjct 13071 CTACTACACGTTCGCC 13056 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 13566 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13625 || || || ||||| |||||||||| | || | ||||||||||| ||||| || ||| Sbjct 14671 GACATCACACCCATCCTTTGATATTCTCCTACACGCTTTTCAAAGAAATTAGTCTTGCCT 14612 Query 13626 TCCAGTGATATATTTTCCATAAAATCAAATGGATT 13660 ||||| || ||||| |||||||| ||||||||||| Sbjct 14611 TCCAGAGAGATATTCTCCATAAAGTCAAATGGATT 14577 Score = 86.0 bits (94), Expect = 6e-12 Identities = 80/100 (80%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 14127 TCTTTAGTA--CTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGT 14184 ||||||| | ||| |||||| |||||||||||||| ||||||||||| || || |||| Sbjct 11701 TCTTTAGAATCCTT--AATGTAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGT 11644 Query 14185 TTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTC 14224 | ||||| || ||||| || ||||| || || | ||||| Sbjct 11643 TCTCCATGGCAATCTGGAAGCCATAGAAACAGCGTGCTTC 11604 >seq22 Length=1337131 Score = 102 bits (112), Expect = 8e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 13896 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13955 |||||||| |||||||||||||| || || || | |||||||| || |||| || || Sbjct 639712 TCATCTCTGCTAATAAGTTCGTTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCTTG 639771 Query 13956 AACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 14014 | ||||||||| || ||||| | || |||||||| || || || || ||||||||||| Sbjct 639772 AGCCAAAATATGGCTGCAAAAGCACCAGAAAAGAAGATGCCTTCTACAGCAGCAAACGC 639830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477950613756600