Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq22 87.8 3e-12 seq4627 84.2 3e-11 >seq22 Length=1337131 Score = 87.8 bits (96), Expect = 3e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 || ||| |||| || || || || ||||| |||||||||||||| ||| |||||| ||| Sbjct 639842 GAAAGAGTGGTTGCGTTTGCTGCTGTAGAAGGCATCTTCTTTTCTGGTGCTTTTGCAGCC 639783 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGAC 125521 || ||||||||||||||| | || | ||||| || || || Sbjct 639782 ATATTTTGGCTCAAGAAGAGAGGGTTAATGCCAGGCCTTAC 639742 >seq4627 Length=64116 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 97209 GAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGC 97268 ||||| || || || ||||| ||||||||||| || || || || |||||||| | Sbjct 18824 GAGACGGGGACGCCCTACATGCTCTACAAGGACTCCTGCAACCGGAAGAGCAACCAGCAG 18765 Query 97269 CACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCC 97322 || |||||||||||||| || ||| || ||||| || ||||| |||||| || Sbjct 18764 AACCTGGGCACCATCAAGTGCAGCAACCTCTGCACCGAGATTGTGGAGTACACC 18711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738313584927240