Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq2566 116 3e-21 seq7650 87.8 2e-12 >seq2566 Length=113286 Score = 116 bits (128), Expect = 3e-21 Identities = 103/129 (80%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 13167 GCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTC 13226 || || | ||||||||||| || ||||| || ||||| || || || ||||| || |||| Sbjct 13197 GCCATACCTCATCTCTACTGATCAGCTCATTAGAAAAAGTAAGCCCAGGCATTAGACCTC 13138 Query 13227 GTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTG 13286 |||| || | ||||||||| | ||||| || || ||||| || |||||||||||||| | Sbjct 13137 GTTTCTTCAGCCAAAATATTGACGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAG 13078 Query 13287 CAAACGCTA 13295 |||| |||| Sbjct 13077 CAAATGCTA 13069 Score = 89.7 bits (98), Expect = 4e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 13420 AATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479 ||| |||||||| || | ||| |||||||||||||||||||| || ||||| || || || Sbjct 11687 AATGTAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGTTCTCCATGGCAATCTG 11628 Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC 13518 ||| ||||| ||||| | || |||| ||| || | ||| Sbjct 11627 GAAGCCATAGAAACAGCGTGCTTCTGTTACTTGTATTTC 11589 >seq7650 Length=83544 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/180 (71%), Gaps = 1/180 (1%) Strand=Plus/Minus Query 5448 GAAAAACATTCCACTGTAAAACCCCACATAATAAAATCCAGACACTATTTTACACGTAAA 5507 |||||| |||||||||| || | | | |||| | |||| | ||||| ||| | Sbjct 27320 GAAAAAGCTTCCACTGTAGAAGCTTAAAAAATAGATTCCACCAATAATTTTGCACATTGG 27261 Query 5508 ATTTCCAAATATCCACTGATCTAACTGATAATGTATTTGAAATGGAAATGACATAACAAA 5567 || |||||||| ||| | |||| |||||| || ||||||| | ||| | || || Sbjct 27260 ATCTCCAAATACCCATTCTTCTACTACATAATGAATCCGAAATGGGATTGAGAAAATGAA 27201 Query 5568 TAACAGATCGGATATGGCTAAATTTATTAAAAATATATCAGTTACAGTCTTTAACTTTCT 5627 | || ||| || ||||||||||||| || |||||||||| | | |||| || ||||| Sbjct 27200 AAGCAAATCAGAAATGGCTAAATTTAATAGGTATATATCAGTCATACTCTTGAA-TTTCT 27142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429425535205398