Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq7643 113 4e-20 >seq7643 Length=26413 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || |||| |||| || | ||| | ||| || ||||| || | ||| || || Sbjct 24812 CCACCCCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 24753 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| || ||||| ||||| ||||||| || || |||||||| |||||| Sbjct 24752 AGGGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGAGGA 24693 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | ||||| || |||||| | | |||||| | | || || Sbjct 24692 ATGCCTTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCCACC 24633 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || ||||| | || ||||| ||||||||||| Sbjct 24632 TCCAGGGTGATGGTCTTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586 Score = 98.7 bits (108), Expect = 9e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||| || ||| | ||| | ||| |||||||| ||||| Sbjct 24554 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCCAGCTGCTTTCCA 24495 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| | || || || ||||||||||| ||||| ||||| | || || ||||| Sbjct 24494 GCAAAGATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 24435 Query 94931 ACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 || | | || ||| | ||| || || || | |||||||| || ||||| | ||| Sbjct 24434 ACATTCTCAATGGTATCA-CTTGGCTCCACCTCTAGGGTGATGGTCTTGCCAGTCAAAGT 24376 Query 94990 TTTCACAAAGATCTGCAT 95007 ||||||||||||||||| Sbjct 24375 CTTCACAAAGATCTGCAT 24358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446630286707640