Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2566 120 4e-22 seq22 116 5e-21 >seq2566 Length=113286 Score = 120 bits (132), Expect = 4e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| |||||||| || || || || ||||| || || || |||||||| || || || | Sbjct 13191 CCTCATCTCTACTGATCAGCTCATTAGAAAAAGTAAGCCCAGGCATTAGACCTCGTTTCT 13132 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||||||||| || || || || |||||||||||||||||||| ||||||||||| | Sbjct 13131 TCAGCCAAAATATTGACGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATG 13072 Query 33446 C 33446 | Sbjct 13071 C 13071 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 33555 TTCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33614 ||| ||| ||| |||| |||||||| || | | |||||||||||| ||||||||||| Sbjct 11702 TTCTTTAGAATCCTTAATGTAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGTT 11643 Query 33615 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACA 33674 || ||||| ||||| || || |||||||| | || || || | |||| |||| | Sbjct 11642 CTCCATGGCAATCTGGAAGCCATAGAAACAGCGTGCTTCTGTTACTTGTATTTCTTGGCT 11583 Query 33675 AAATCGTTCCGCC 33687 ||||| ||| || Sbjct 11582 GAATCGCTCCACC 11570 >seq22 Length=1337131 Score = 116 bits (128), Expect = 5e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| ||||| ||||||||||| || || || || ||||||| || | ||| || Sbjct 639712 TCATCTCTGCTAATAAGTTCGTTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCTTG 639771 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33447 ||||||||||||| || || | |||||||||||||| |||||||| |||||||| ||| Sbjct 639772 AGCCAAAATATGGCTGCAAAAGCACCAGAAAAGAAGATGCCTTCTACAGCAGCAAACGCA 639831 Query 33448 ATAAGTCTCTCTCC 33461 | | ||| || || Sbjct 639832 ACCACTCTTTCACC 639845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620639188410840