Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq8838 131 1e-25 seq7643 93.3 3e-14 seq54653 86.0 4e-12 >seq8838 Length=18498 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct 7710 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGGTAGGGACAGTGGGAATCTCGT 7769 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 7770 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 7804 Score = 98.7 bits (108), Expect = 7e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 10231 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATCGGTCTCGT 10290 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 10291 GCCGGTATTTAGCCTTA 10307 >seq7643 Length=26413 Score = 93.3 bits (102), Expect = 3e-14 Identities = 163/236 (69%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| |||| ||||| || | ||| || ||| |||||| || || ||||| || || Sbjct 24584 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 24525 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | || ||||| ||||| || || | ||||| || | || Sbjct 24524 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGAGGA 24465 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT---TCA 38267 | |||||| |||||| || || ||||||||||| | |||| ||||| || Sbjct 24464 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTAT---CACTTGGCTCC 24408 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTTA 38323 || |||| || || || || || ||||| || ||||| || |||||||| ||||| Sbjct 24407 ACCTCTAGGGTGATGGTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCATTTTTTA 24352 >seq54653 Length=755 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 || ||||||||||||||||||||||||| || | ||||||||| |||||||||||| Sbjct 464 CTGTCTCTTCAAAGTTCTTTTCAACTTTTCCGTAAGGTACTTGTCGACTATCGGTCTCGT 405 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 404 GCCAGTATTTAGCCTTA 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 333737249190569