Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2566 91.5 2e-13 seq22 87.8 2e-12 >seq2566 Length=113286 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 93128 ATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATT 93187 |||| |||||| || || | || || | || ||||||||||| |||||||||||| Sbjct 13177 ATCAGCTCATTAGAAAAAGTAAGCCCAGGCATTAGACCTCGTTTCTTCAGCCAAAATATT 13118 Query 93188 GAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCG 93247 || |||||| |||||||| || || ||||| || || |||||||| || | ||||||| Sbjct 13117 GACGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATGCTACTACACGTTCG 13058 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 93593 ACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGA 93652 || ||||| | ||||| || || || |||||||| |||||||| | ||| ||||| || Sbjct 8276 ACCTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGG 8217 Query 93653 TATTGAATTGGAAATATGACAAAACGATTAGGGTTATC 93690 |||||||| ||||| ||||||||||| | ||| || || Sbjct 8216 TATTGAATAGGAAAAATGACAAAACGGTGAGGATTGTC 8179 >seq22 Length=1337131 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| || || ||||||| | ||||| |||||||| ||||| || |||| || ||| Sbjct 642647 ATGTAAGTGTCTATTAACAAACTGTACATCTCAGAATGAACATTTTCTATTGATATCTGG 642706 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462 || || |||||||| | |||||| | ||| ||||||||||| Sbjct 642707 AAGCCATAGAAACAACGAGCTTCTGGGATTTGCACTTCTTG 642747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554797637696760