Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq7643 154 3e-32 seq25499 111 3e-19 >seq7643 Length=26413 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || |||||||| || |||||||| || || || || || | Sbjct 24803 AGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGG 24744 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||||| |||||| || || || || | || || || || || |||||||||||| Sbjct 24743 CCATCTTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATGCCTTCC 24684 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||| || || || |||||| ||| |||||||| | || || |||| |||| Sbjct 24683 TTGTCTTGGATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTG 24624 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || | |||||| ||||| |||||||| Sbjct 24623 ATGGTCTTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586 Score = 149 bits (164), Expect = 1e-30 Identities = 159/209 (76%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || |||||||| || |||||||| || ||||| || || | |||||||| | Sbjct 24565 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCCA 24506 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| || || || || || || |||||||| || ||||||||||||||||| || | Sbjct 24505 GCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGGA 24446 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| ||||| || ||| ||||| || || || || || | ||||||||| || | Sbjct 24445 TCTTGGCCTTCACATTCTCAATGGTATCACTTGGCTCCACCTCTAGGGTGATGGTCTTGC 24386 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || | ||||| || || ||||||||| Sbjct 24385 CAGTCAAAGTCTTCACAAAGATCTGCATT 24357 >seq25499 Length=1430 Score = 111 bits (122), Expect = 3e-19 Identities = 143/196 (73%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 68266 TGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGG 68325 |||| || ||| ||||| | || || ||||| | | ||||||| | |||||| | | Sbjct 193 TGGATTCCTTTGGGATGCTGTAGTCAGAGAGGATGCGATCATCTTCCAGCTGCTTTCAG- 251 Query 68326 CGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGA 68385 | || || || || |||||||| || |||||||||||||| || |||||||| || |||| Sbjct 252 CAAAGATCAGCCTCTGTTGGTCTGGCGGAATGCCTTCCTTATCCTGAATCTTGGCATTGA 311 Query 68386 CGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCT 68445 || ||||||| | | || | |||| ||||||||| || || || | ||| | Sbjct 312 GATTTTCAGTGGTGTCACCGGGTTTCAACTCCAGGGTGATGGTCTTCCCAGTTAAGGTAT 371 Query 68446 TGACGAATATCTGCAT 68461 ||| ||| |||||||| Sbjct 372 TGATGAAGATCTGCAT 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918207800528280