Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq87445 150 3e-31 seq4627 145 1e-29 seq275052 105 1e-17 seq22 84.2 4e-11 >seq87445 Length=486 Score = 150 bits (166), Expect = 3e-31 Identities = 161/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 244326 TGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGC 244385 ||||||| |||||||||| ||||||| |||||| ||||| | |||||||| |||| Sbjct 47 TGCTGACCGGGCTGCCCTGGTAGGTCTCGTAGGGCCCGTCTTCCCTGGCCAGCTGGCAGC 106 Query 244386 TCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGC-GGGCC 244444 | | || ||||| |||||||||||||||||||||| || ||| | | || ||||| Sbjct 107 TGGCCTCCAGGGCCCAGTAGTAGATGGTCTCGAAGATCTGCTGGTTGA-GCAGCTGGGCC 165 Query 244445 TTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504 | | || |||||||| | ||| | |||||| |||||||||| |||||||| || Sbjct 166 TCGGGGCTCTCGAAGGGGAACCTCATGAGGATGAAGGCGTCGGCCAGGCCCTGCACCCCA 225 Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAG 244534 ||||| ||||| | ||| ||||| |||||| Sbjct 226 ATGCCAATGGGGCGGTGGCGCTTCTTGGAG 255 >seq4627 Length=64116 Score = 145 bits (160), Expect = 1e-29 Identities = 110/130 (85%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 244704 CCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGG 244763 ||||||| ||| | ||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 18695 CCACCTCATCCTTGCTGGTGTACTCCACAATCTCGGTGCAGAGGTTGCTGCACTTGATGG 18754 Query 244764 TGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCC 244823 ||||||||| ||| || ||| ||| |||||||| |||||||||||||||| ||||| Sbjct 18755 TGCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGCG 18814 Query 244824 CCCCGGTCTC 244833 ||| ||||| Sbjct 18815 TCCCCGTCTC 18824 Score = 132 bits (146), Expect = 9e-26 Identities = 117/146 (80%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062 |||| | |||||||||||| |||||||||||||| | ||| ||||||| || |||||| Sbjct 20677 ACCCGTTTCATGAAGAGGTCCGGGATCCAGAGGGCGTAGAAAAGGTCCCGGGCTCTCTGC 20736 Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122 || ||| || ||||||||| ||| || | || ||||||| ||||| |||||||||| Sbjct 20737 TCCTCCTTCCCGGTGTTCTTCTTCAAGTCGAGGAACTCAAAGATGTCGAAGTGCCAGGGC 20796 Query 245123 TCCATGTAGACAGCGAGGGCGCCGGG 245148 |||| ||||| |||| ||| ||||| Sbjct 20797 TCCAGGTAGATGGCGAAGGCCCCGGG 20822 Score = 89.7 bits (98), Expect = 1e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG 243933 || |||||| |||||||||||||||| ||||| | |||| || || ||||| | | || Sbjct 13071 GATGTTGAGAGACTGGCTCTGGTCGATGAAGGCCCCCCGGTCAGCCGCCATCTTCAGGAT 13130 Query 243934 GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCC 243993 | |||||| || ||||| || |||||||||||| |||| | || ||| |||| | | Sbjct 13131 GGTCTTCTGGGAGATCTCCCACACCGTCTTGTAGAGCTGCTTCAAGTCCTCAGGGATCTC 13190 Query 243994 TTCGATGTTCTG 244005 ||| ||||| Sbjct 13191 CGGGATATTCTG 13202 >seq275052 Length=209 Score = 105 bits (116), Expect = 1e-17 Identities = 82/97 (85%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 228129 AGCTTC--AGTATAAAACGCTCATTTTAGCGCTTCTGTGACCATTAACACTCTGTTAGTG 228186 |||||| || |||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct 209 AGCTTCTAAGCATAAAACGCTCAGTTTAGCGCTTTTGTGAAGGGTAACACTCTGTTAGTG 150 Query 228187 CAACTAAGCAAATGAACAGAAAGAAAGCTCAGAAGTG 228223 ||||||||||| ||| |||| |||||| || ||||| Sbjct 149 CAACTAAGCAATCGAAAAGAATGAAAGCCCACAAGTG 113 >seq22 Length=1337131 Score = 84.2 bits (92), Expect = 4e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| || ||| | || || || ||||||||||| || || || || || |||| || | Sbjct 639835 TGGTTGCGTTTGCTGCTGTAGAAGGCATCTTCTTTTCTGGTGCTTTTGCAGCCATATTTT 639776 Query 42766 GGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 |||||||| ||| | || ||||| || || || ||||| |||||||| || ||||| | Sbjct 639775 GGCTCAAGAAGAGAGGGTTAATGCCAGGCCTTACTTTCTCCAACGAACTTATTAGCAGAG 639716 Query 42826 ACGA 42829 | || Sbjct 639715 ATGA 639712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 940840435068240