Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq6438 98.7 1e-15 seq7643 95.1 1e-14 seq2976 89.7 6e-13 seq1780 89.7 6e-13 seq732 89.7 6e-13 seq1775 87.8 2e-12 seq481 87.8 2e-12 seq12261 86.0 7e-12 seq40285 82.4 8e-11 >seq6438 Length=36418 Score = 98.7 bits (108), Expect = 1e-15 Identities = 73/85 (86%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 56997 GAAAAATTT---TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 57053 ||||||||| ||||| || | | |||||||||| ||||||||||||||||||||| Sbjct 7448 GAAAAATTTCACTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 7507 Query 57054 ATACTCACCACTATACTACCGAGGA 57078 |||||||||||||||||| |||||| Sbjct 7508 ATACTCACCACTATACTAACGAGGA 7532 >seq7643 Length=26413 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| |||| || || || | || ||||||||||| ||||| || Sbjct 24777 CTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAA 24718 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | | |||||| || | || | || |||||||| |||||| ||||| | Sbjct 24717 GATCAACCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGGATTTTGGCTTTGACGTT 24658 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| || | ||||| || | |||||||| || || |||| ||||| || Sbjct 24657 CTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTTAAGGTCTTCAC 24598 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 24597 GAAGATCTGCAT 24586 >seq2976 Length=375034 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 128084 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 128143 Query 57065 TATACTACCGAGGA 57078 ||||||| |||||| Sbjct 128144 TATACTAACGAGGA 128157 >seq1780 Length=167991 Score = 89.7 bits (98), Expect = 6e-13 Identities = 71/85 (84%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 56997 GAAAAATTT---TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 57053 ||||||| | ||||| || | | |||||||||| ||||||||||||||||||||| Sbjct 8299 GAAAAATCTGCATCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 8358 Query 57054 ATACTCACCACTATACTACCGAGGA 57078 ||||| |||||||||||| |||||| Sbjct 8359 ATACTTACCACTATACTAACGAGGA 8383 >seq732 Length=637555 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 632155 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 632214 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 632215 TACTAACGAGGA 632226 >seq1775 Length=152888 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 151349 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 151290 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 151289 ATACTAACGAGGA 151277 >seq481 Length=401036 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 74938 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 74997 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 74998 ATACTAACGAGGA 75010 >seq12261 Length=14962 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 10417 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 10358 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 10357 TACTAACGAGGA 10346 >seq40285 Length=966 Score = 82.4 bits (90), Expect = 8e-11 Identities = 67/81 (83%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 56997 GAAAAATTT---TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 57053 |||||| || ||||| || | | |||||||||| ||||||||||||||||||||| Sbjct 81 GAAAAACTTGAGTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 22 Query 57054 ATACTCACCACTATACTACCG 57074 ||||| |||||||||||| || Sbjct 21 ATACTTACCACTATACTAACG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541200203366160