Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq6935 141 1e-28 seq1978 138 2e-27 >seq6935 Length=32064 Score = 141 bits (156), Expect = 1e-28 Identities = 205/284 (72%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 8894 GGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGTCT 8953 || || ||||||||||| |||| ||| || | | || || ||||| ||||| Sbjct 13562 GGGCAGCCCTTCACATTATTGCAAACAAGGCTTTGGAGTGAGGCTGTATTCACAATGTCA 13503 Query 8954 AAACCTAC-GTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTT 9012 || || || || ||| || || || || || |||||||| | || ||||||||||| || Sbjct 13502 AAGCCCACTGTACCC-CCAAAAGTACTTGGCTTCCAGTATTCAGGTGAGCAGATGACATT 13444 Query 9013 CGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGAT 9072 ||| || ||||||||||| || ||||| || || || || ||| ||||||| ||||| Sbjct 13443 TCCCAGAAGACCTTTCAAGGAGAAGGGAGCGCCAAGTTCAATCATGGTCTCACCAAAGAT 13384 Query 9073 GGCACCGGGACGCGGTTTTTCGACGATGAAG-CCAGTGTAGAGTTCGACAGCCTCGACGT 9131 ||| || ||||| || ||||| | | |||| ||| ||| | ||| | ||| || | || Sbjct 13383 GGCTCCAGGACGTGGCTTTTC-AATAAGAAGAGCAGGGTATAATTCCATAGCATCAATGT 13325 Query 9132 CGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 | ||||| || |||| | || ||||| || || || |||||| Sbjct 13324 CTCCATAAAGTTCTTCAAGTTCTGCAGCCATTTCTTTTTCACCT 13281 Score = 100 bits (110), Expect = 4e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 9754 TCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACCCTGTTGTGTTCTCTC 9813 || ||| ||||||| |||||||| ||| |||| || ||||||| || ||||| | Sbjct 10874 TCATCATCCCATTCTGGGTGTTCTCCTTTAAGAATGTCACAGACCCGATTATGTTCCCGG 10815 Query 9814 AGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAACACTTCATTCCCCACT 9873 ||||| | ||||| |||||||| | || || || || ||||| || || | || || Sbjct 10814 AGCCACAATGTGGCATACATCATCAGCCCTGGAACCAAGCCAAAGACCTCCTGTCCTACA 10755 Query 9874 GCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGCACCTGGGTCTCTTTG 9933 | ||| ||| | || || | | ||| | ||| | ||| | |||| || ||||| Sbjct 10754 GAAAATTTCAGGTGGTCAGGGATATGGGGTGGATAGATCATTTCTGCCTGAGTTTCTTTC 10695 Query 9934 ACGGTGGGGGGATACATTTCACCGTCAATAACCTG 9968 || || || ||||||||||| || ||||| | ||| Sbjct 10694 ACAGTAGGTGGATACATTTCTCCATCAATCATCTG 10660 Score = 86.0 bits (94), Expect = 9e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 9493 ATGGAATTGTTGTAAACGAAGTGTTCGTAACCATA--CTTCGCGTCGCCTATGCGAAAAT 9550 ||||| ||||| || | ||| || | ||| ||| ||| | | | |||| ||| Sbjct 11885 ATGGAGTTGTTATACATGAACTGCTGGTACGTATATTCTTGGTTTTGGATATG--AAAGG 11828 Query 9551 CATCAGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCT 9610 |||||||| |||| |||||| ||||||||||||||||||| || ||||||| ||||| Sbjct 11827 TATCAGGCAGAAGAGGATGCCAATGGTAGAGGGTATTGAACTCTGCTGCTATTCTGTTCT 11768 Query 9611 GGTACTGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTA 9668 | || ||||| ||| ||| || | || || ||||| | || | ||| ||||| Sbjct 11767 GATATTGAAATCTCTGGT--TGAAGAGAAGTTCTGGATCAAACTTCAGTTTGAAATGGTA 11710 Query 9669 CCCGCTGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719 || || | || || || || | | || | ||| || |||||||| || Sbjct 11709 TCCACTTAAATGTTGCACGTAGTCTTCAATCACAATCTTGATGGTTTCTCC 11659 >seq1978 Length=181997 Score = 138 bits (152), Expect = 2e-27 Identities = 177/244 (73%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 8936 GCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCC 8995 || || |||||||| | || || | | | || |||||||||||||| |||||||| | Sbjct 47747 GCCGTGTTCACGATTTGGAAGCCGATGGCGCCCCCGAAGGTGCTGGGCTTCCAGTATTCA 47688 Query 8996 GGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATG 9055 |||||||||||| |||| | | |||||| |||||||| || |||||||||| |||||| Sbjct 47687 GGGGAGCAGATGGGGTTCCCAAGGAGCCCCTTCAAGGAGAAGGGAGCCCCCATCTCGATC 47628 Query 9056 ATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGT 9115 ||||| | || |||||| |||| | || || || | | ||||| | ||| Sbjct 47627 ATGCTTTGTCCAAAGATGCTGTCGGGGTAGGTCTTCTCCACCAACAGGCCAGGGAAGAAC 47568 Query 9116 TCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 || | ||| |||| ||| ||||| || |||||| | |||| | || |||| ||| || Sbjct 47567 TCCAGAGCATCGATGTCTCCATACAGCTCTTCCAGCGTGGCAACCATGTCCTCGTCATCT 47508 Query 9176 ACAA 9179 ||| Sbjct 47507 GCAA 47504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 721046596806600