Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq7643 132 1e-25 seq25499 91.5 3e-13 seq12261 89.7 1e-12 >seq7643 Length=26413 Score = 132 bits (146), Expect = 1e-25 Identities = 161/219 (74%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 24570 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATC 24511 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||||||||||||| || ||||| || | ||| ||||| ||| ||| ||||| || Sbjct 24510 TTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTC 24451 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| |||||| || | ||| || ||| || || || | ||||| || Sbjct 24450 CTGGATCTTGGCCTTCACATTCTCAATGGTATCACTTGGCTCCACCTCTAGGGTGATGGT 24391 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||| || || | ||| |||||||| || || |||||| Sbjct 24390 CTTGCCAGTCAAAGTCTTCACAAAGATCTG---CATTTT 24355 Score = 122 bits (134), Expect = 2e-22 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||||||||||||||| |||||||| |||| ||||||||||| | || | ||||| Sbjct 24798 CAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATC 24739 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||| ||||||||||| || ||||| | | |||||| || ||| ||| ||||| || Sbjct 24738 TTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATGCCTTCCTTGTC 24679 Query 199537 CTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595 || || ||| || || ||| || | |||||| | | || || |||| ||||| | Sbjct 24678 TTGGAT-TTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 24620 Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| || || | || ||||| || || || Sbjct 24619 TCTTCCCAGTTAAGGTCTTCACGAAGATCTG 24589 Score = 100 bits (110), Expect = 7e-16 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || || ||||| |||| ||||||||||| | || | ||||| Sbjct 25012 CAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 24953 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 |||||||||||| ||||| ||||| || | ||| ||||| ||| Sbjct 24952 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGTTGGTCTGGA 24910 >seq25499 Length=1430 Score = 91.5 bits (100), Expect = 3e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| || || || |||||||| || | ||||||||||| | | | |||||| Sbjct 403 CAGGACAAGATGCAGGGTGGACTCCTTCTGTATGTTGTAGTCAGAGAGGTTGCGTCCATC 462 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||||||| | ||||| || | ||| ||||| || ||| |||||| Sbjct 463 TTCCAGCTGCTTTCCAGAAAAGATCAGCCTCTGTTGGTCTAGAGGAATGCCTTCT 517 >seq12261 Length=14962 Score = 89.7 bits (98), Expect = 1e-12 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| |||||||| || |||||||| |||| ||||||||| | | ||| | ||||| Sbjct 13844 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCATC 13785 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGC 199510 |||||||||||| || || ||||| || | |||| Sbjct 13784 TTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGC 13751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1174444512963733