Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq7643 116 4e-21 seq22 84.2 2e-11 >seq7643 Length=26413 Score = 116 bits (128), Expect = 4e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 38239 AAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298 |||||||||| || || || || || | || ||||| ||||||||| | || || ||| Sbjct 24353 AAAAAATGCAGATCTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTAGAGGTGGAGC 24412 Query 38299 CCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 | | || | | | | | | || | || |||| ||||| || || ||||| | | Sbjct 24413 CAAGTGATACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAG 24472 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||||||| |||| || | || || || |||||||| || | |||||||| ||||| Sbjct 24473 ACCAACAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCCGACT 24532 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||| ||||| | || || ||| | || |||||| |||| || || Sbjct 24533 ACAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGG 24584 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || ||||||||| | || || ||| ||| Sbjct 24586 ATGCAGATCTTCGTGAAGACCTTAACTGGGAAGACCATCACCCTGGAGGTGGAGCCCAGT 24645 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| ||||||| ||||| || || ||||| | || || Sbjct 24646 GACACCATTGAGAACG-TCAAAGCCAAAATCCAAGACAAGGAAGGCATTCCTCCTGATCA 24704 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || || ||||| || || | |||||||| |||||||| Sbjct 24705 GCAGAGGTTGATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACCCTTTCTGACTACAA 24764 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || || | || |||||| |||| || ||| Sbjct 24765 CATCCAGAAGGAGTCCACTCTCCACCTTGTCCTGCGTCTGAGGGGTGGC 24813 Score = 93.3 bits (102), Expect = 4e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 ||||||||| |||| || | || ||||| |||||||| || | ||||||||| ||| Sbjct 24914 GACCAACAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGAC 24973 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||||| |||||| | || || || | || |||||| ||||||| ||| Sbjct 24974 TACAACATCCAGAAGGAATCCACCCTCCACCTTGTCCTGCGTCTGAGAGGAGGC 25027 >seq22 Length=1337131 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 || || ||| ||| ||||||||| |||||| | ||| ||||| | || | || ||| Sbjct 639712 TCATCTCTGCTAATAAGTTCGTTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCTTG 639771 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 |||||||||||||| || ||| || |||||||||| ||| || || || || || || Sbjct 639772 AGCCAAAATATGGCTGCAAAAGCACCAGAAAAGAAGATGCCTTCTACAGCAGCAAACGCA 639831 Query 133039 ACCA 133042 |||| Sbjct 639832 ACCA 639835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498319666028160