Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq184 390 8e-103 seq1740 98.7 7e-15 seq964 95.1 9e-14 seq488 93.3 3e-13 seq3411 91.5 1e-12 seq1186 89.7 4e-12 >seq184 Length=633779 Score = 390 bits (432), Expect = 8e-103 Identities = 972/1460 (67%), Gaps = 22/1460 (2%) Strand=Plus/Minus Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 517272 |||||| || ||||| || || ||| ||| || || | ||||| ||||| || Sbjct 24856 ATTAGTTATTGTAATCTTGTTCTCTTTTCCTGTGCTCTTGTCCACTGCAGTAACATTGAG 24797 Query 517273 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 517332 ||||| || ||||| | || ||||| || |||||||| || || || | | ||||| Sbjct 24796 GATACCGTTTGCATCTATGTCGAATGTCACCTCAATTTGGGGCACACCACGAGGTGCAGG 24737 Query 517333 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 517392 ||| || ||| || | ||| | ||||| ||| || || || || | || || Sbjct 24736 TGGAATACCTGTCAGGTCAAACTTGCCCAGCAGATTGTTGTCCTTGGTCATGGCTCTCTC 24677 Query 517393 ACCCTCGAAAATTTGGAT-AGTA-ACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 517450 |||||| | | ||| | || | ||||| | || || |||||||| || || || | Sbjct 24676 ACCCTCATACACTTGTACCAGCACACTAC--TCTGGTTGTCTGAATAGGTAGTGAAGG-T 24620 Query 517451 CTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 517509 |||| ||| || ||||| |||||||| | | || | ||||| | |||||| Sbjct 24619 CTGGGTTTGCTTGGTGGGAATAGTTGTGTTGCGCTTGATTAAGGCAGTCATCACACCACC 24560 Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 517569 || || || | ||| |||||||| || | ||||||| || | | | ||| | || Sbjct 24559 AGCGGTCTCAATACCCAGAGAAAGTGGTGCTACATCAAGCAGCAGGAGGTCTTGCACATT 24500 Query 517570 TTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628 ||| | | || | ||| | |||||||| || || | |||||| |||||||| || |||| Sbjct 24499 TTC-TGATTTGTCACCCATCAGAATAGCAGCCTGCACAGCAGCGCCATATGCCACGGCTT 24441 Query 517629 CATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGT 517687 |||||||||| | ||| ||||| | ||| ||||| || |||| ||| | || || | Sbjct 24440 CATCAGGATTTATGCTTTTGTTTAGCTCTTTTCCATTAAAGAAATCTTGGAGCAACTTTT 24381 Query 517688 CTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 517747 | ||| |||||||||| ||| || ||||| | |||||||||| | |||| ||| Sbjct 24380 GG-ATCTTGGGAATACGAGTTGAGCCACCAACCAGAACAATTTCATTAATCTGTCCTTTG 24322 Query 517748 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCT 517807 || || || | ||| | | | || || || ||||||||| | | || | || Sbjct 24321 TCTAGCTTAGCATCACGAAGAGCCTTCTCCACAGGTTCAAGAGTACCACGGAAGAGATCC 24262 Query 517808 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAAC 517867 | | || || || || ||| | |||| | || ||||||| || || || Sbjct 24261 GCATTGAGCTCCTCAAAGCGAGCACGGGTAATGGATGTATAGAAATCAATGCCATCAAAT 24202 Query 517868 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 517927 || || |||| ||||| | || || || || ||| || | |||||| || | ||| Sbjct 24201 AATGAGTCAATCTCAATAGAAGCCTGGGTGGAGGAACTCAGGGTACGTTTGGCTCTCTCA 24142 Query 517928 CATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTT--TTATATT 517985 || ||||| | || | ||| | ||| ||| |||| ||| | |||| | Sbjct 24141 CAGGCTGTGCGGAGCCGTCGAACTGCTC--GCTTATTGCCAGCAATGTCACGCTTATGCT 24084 Query 517986 TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCA 518045 | | |||||| || || ||| | | || | ||||| ||||| || || || |||| Sbjct 24083 TGCGCTTGAATTCCTCCACAAAGTGACTCACCATGCGATTGTCAAAGTCCTCCCCACCCA 24024 Query 518046 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 518105 | | |||| ||| | |||| | | |||| || | |||||||||| | ||||| | Sbjct 24023 AGTGGGTATCTCCAGCAGTAGATTTCACTTCAAAGATGCCATCTTCAATGGTCAAAATGG 23964 Query 518106 TTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG- 518164 |||||| || |||||||||| ||||| || ||||||||| | || || | Sbjct 23963 AAACATCAAATGTGCCACCACCCAAGTCAAAGATCAGTACATTCTTCTCACCTGCTCTGC 23904 Query 518165 -----TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 518219 |||||||| | |||||| |||| |||||||| || || |||||||| || | || Sbjct 23903 TCCCTTTTTTATCCAAACCATAGGCAATGGCAGCAGCCGTCGGCTCATTAATGATGCGCA 23844 Query 518220 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 518279 | || || ||||| | ||| | ||||||||||| |||||||| | ||| || || || | Sbjct 23843 ATACGTTGAGACCTGTAATGGTACCTGCATCTTTGGTGGCTTGACGTTGGGAGTCATTGA 23784 Query 518280 AATATGCAGGAACAGTAATAACGGCA-TCAGTTACTTCTTTACCAATATAAGCGCTTGCC 518338 | |||||||| |||||||| || ||| || | |||| ||| | ||||| || Sbjct 23783 AGTATGCAGGTACAGTAATTACAGCACTCTG-GACTTTGCGACCCAGGTAAGCCTCGGCT 23725 Query 518339 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGAT 518398 ||| |||||||| | || | ||| || ||||||| ||| || | | | ||||| Sbjct 23724 ATTTCCTTCATTTTGGTCAATACCATAGAGGAAATTTCTTCAGGAAAGAAGTTCTTGGTG 23665 Query 518399 TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGC 518458 ||| | || |||| | | || || | | | | | || || ||| Sbjct 23664 TCACCCTTGTACTCGACTTGCACCTTGGGCTTCCCAGCTTCGCTCACCACACGGAAAGGC 23605 Query 518459 CAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTT 518518 |||| |||||||| || || || | |||||| || | | ||||| | || || Sbjct 23604 CAGTGCTTCATATCGGACTGCACCGTAGGGTCATCGAATTTGCGGCCAATGAGACGCTTG 23545 Query 518519 GCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATC 518578 |||||||| || |||||| | ||||| || || |||||| |||||||||||||| || Sbjct 23544 GCATCAAAGATGGTATTGTTAGGATTCATAGCCACTTGATTCTTGGCTGCATCTCCGATA 23485 Query 518579 AGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTC 518638 || |||| || || ||||| | ||| || || || ||||| || ||||| || || Sbjct 23484 AGCCGTTCAGTGTCCGTAAAGGCAACGTAGCTCGGTGTAGTGCGGTTGCCTTGGTCGTTG 23425 Query 518639 GCAATAATTTCAACTTTACC 518658 || ||||| || ||||| || Sbjct 23424 GCGATAATCTCCACTTTCCC 23405 >seq1740 Length=166013 Score = 98.7 bits (108), Expect = 7e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || | ||||| |||| ||||| |||||||| || |||||||||| | ||| Sbjct 125346 TTTTTGTCCAAGCCATAAGCAATCGCAGCTGCAGTTGGCTCGTTAATAATTCGGAGCACA 125287 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || || |||||||| ||||||||||||| ||||| || | || || || || || || Sbjct 125286 TTGAGGCCAGCAATGGTTCCTGCATCTTTCGTGGCCTGGCGCTGAGAGTCATTGAAGTAA 125227 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 || || || || | ||||||| Sbjct 125226 GCTGGGACTGTGACCACGGCAT 125205 Score = 95.1 bits (104), Expect = 9e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || | || || |||| ||||| |||||||| ||||||||||||| | ||| Sbjct 126295 TTTTTGTCCAAGCCGTAAGCAATCGCAGCTGCAGTTGGCTCATTAATAATTCGGAGCACA 126236 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || || |||||||| |||| |||||||| ||||| || | || || || || || || Sbjct 126235 TTGAGGCCAGCAATGGTTCCGGCATCTTTCGTGGCCTGGCGCTGAGAGTCATTGAAGTAA 126176 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 || || || || | ||||||| Sbjct 126175 GCTGGGACTGTGACCACGGCAT 126154 Score = 89.7 bits (98), Expect = 4e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 |||||| |||||| ||||| || || ||||||||||| | |||||| ||||||||||| Sbjct 129095 TTATCAACGGCAGAAACATTGAGGATGCCATTGGCATCAATATCAAAGGTGACTTCAATC 129036 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 517341 |||||||| ||||| |||| || || || || Sbjct 129035 TGAGGGACACCTCTGGGAGCTGGAGGAATGCC 129004 >seq964 Length=398110 Score = 95.1 bits (104), Expect = 9e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 || || || ||||||||||| |||||||||||||||||||| ||| | ||||| ||| Sbjct 272808 TGCACTCTCATTTTGACAGAAGGAGATTCAGCTAAAACATTAGCTGTTTCTGGCCTTGGA 272749 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 ||| | || || || | | |||||| || ||||| |||||||| || | ||||| || Sbjct 272748 GTTGTGGGTAGGGACAAATTTGGAGTATTTCCACTGCGAGGAAAAATTCTTAATGTACGG 272689 Query 635561 GATGC 635565 || || Sbjct 272688 GAAGC 272684 >seq488 Length=331261 Score = 93.3 bits (102), Expect = 3e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 518154 CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 518213 ||||||||| ||||| | ||||| || | ||| ||||| ||||| |||||||||| Sbjct 229409 CTTTGTCTTCAACCTTATCTAATCCATAAGCTAGAGCTGCAGCTGTTGGCTCATTAATAA 229468 Query 518214 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259 |||||||||||| | |||||||| ||| |||||||||||||| Sbjct 229469 CTCTCAAAACATTCAATCCAGCAATCTGTCCAGCATCTTTAGTGGC 229514 >seq3411 Length=243986 Score = 91.5 bits (100), Expect = 1e-12 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 ||||| ||||||| || ||||||||||| || ||| | || ||| | |||||| | | Sbjct 201041 TGTACATTAATTTTAACTGAGGGAGATTCTGCCAAATCTTTAGCTGTCTCTGGTTTAGGT 201100 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 ||||||||||||||| ||||| || || ||||| || |||||| || | || ||| | Sbjct 201101 GTTATTGGAAGAGATAGATATGGGGTATTTCCACTCAGGGGAAAAATTCTTAACGTTCGT 201160 Query 635561 GATGC 635565 || || Sbjct 201161 GAGGC 201165 >seq1186 Length=256696 Score = 89.7 bits (98), Expect = 4e-12 Identities = 135/192 (70%), Gaps = 9/192 (5%) Strand=Plus/Minus Query 1047664 AAATTTACAGGAAAATTATTTTATGATATTGTTATGGGTATTGAATTTAATCCTGAAATA 1047723 ||||| || || || || || ||||| | | ||||| |||||||||||||| | Sbjct 208217 AAATTCACTGGCAATTTCTTCTATGACTTCATGATGGGAATTGAATTTAATCC---ACGC 208161 Query 1047724 TTTGGAAC------TGATTTGAAACTGTTTTTTAATGGTAGACCCGGAATTATTGCTTGG 1047777 || |||| |||||| ||| ||||||||||||| |||| |||||| | | ||| Sbjct 208160 TTGGGAAAGTGGTTTGATTTTAAATTGTTTTTTAATGGCCGACCTGGAATTGTAGGATGG 208101 Query 1047778 AATTTGATTAATTTGTCGTGTGCAATGAAACAATACGAAAATTTTGGATACGTTTCTAAT 1047837 | |||||||||||| || | ||| |||||| | ||| | ||| | || ||||| Sbjct 208100 ACTTTGATTAATTTATCCTATGCTGCAAAACAACAGGAATTATATGGGCAAGTCACTAAT 208041 Query 1047838 TCAATGATTCTT 1047849 || ||| | ||| Sbjct 208040 TCTATGCTACTT 208029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3766114105281694