Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq7643 158 3e-33 seq25499 84.2 5e-11 >seq7643 Length=26413 Score = 158 bits (174), Expect = 3e-33 Identities = 164/214 (77%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || |||||||| || || || ||||| |||| ||| || | |||||||| Sbjct 24566 ACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCC 24507 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | ||||||||||||||||||||||| ||||| || Sbjct 24506 AGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGG 24447 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108 || || ||| || ||||||||||| || |||| ||||| || ||||| | ||| Sbjct 24446 ATCTTGGCCTTCACATTCTCAATGGTATC---ACTTGGCTCCACCTCTAGGGTGATGGTC 24390 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || |||||||| || || || | ||||||| Sbjct 24389 TTGCCAGTCAAAGTCTTCACAAAGATCTGCATTT 24356 Score = 149 bits (164), Expect = 1e-30 Identities = 161/212 (76%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||||||||| || || || ||||| || | ||| || | |||||||| Sbjct 24794 ACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCT 24735 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| | | || || || |||||||||||||| |||||||| Sbjct 24734 AGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGG 24675 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 ||||| |||||||||||||||||||| ||| ||||| || ||||| | ||| Sbjct 24674 ATTTTGGCTTTGACGTTCTCAATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTC 24618 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || || || || ||||| | ||||| Sbjct 24617 TTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586 >seq25499 Length=1430 Score = 84.2 bits (92), Expect = 5e-11 Identities = 147/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || |||| || ||| | || |||| || | || | | ||||||| Sbjct 180 ACAAGATGGAGGATGGATTCCTTTGGGATGCTGTAGTCAGAGAGGATGCGATCATCTTCC 239 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| | || ||||| || | ||||||||||| ||||||||||| || || ||| Sbjct 240 AGCTGCTTTCA-GCAAAGATCAGCCTCTGTTGGTCTGGCGGAATGCCTTCCTTATCCTGA 298 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC-CGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || |||| || ||| ||||||| | |||| || || ||||| | ||||| Sbjct 299 ATCTTGGCATTGAGATTTTCAGTGGTGTCACCGGGTTTCAAC-TCCAGGGTGATGGTCTT 357 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || || || | ||| | ||||| Sbjct 358 CCCAGTTAAGGTATTGATGAAGATCTGCAT 387 Score = 84.2 bits (92), Expect = 5e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || |||||||| || || || ||||| || | || | | |||||||| Sbjct 407 ACAAGATGCAGGGTGGACTCCTTCTGTATGTTGTAGTCAGAGAGGTTGCGTCCATCTTCC 466 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 |||||||| || | ||||| || | ||||||||| |||||||||||||| || Sbjct 467 AGCTGCTTTCCAGAAAAGATCAGCCTCTGTTGGTCTAGAGGAATGCCTTCTATG 520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1105268219154033