Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq184 208 6e-48 seq1238 123 2e-22 seq7643 91.5 1e-12 >seq184 Length=633779 Score = 208 bits (230), Expect = 6e-48 Identities = 377/548 (69%), Gaps = 4/548 (1%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || ||||| || || || || ||||| || || || || |||| || | || ||| Sbjct 23351 GCCATAGGCATTGACTTGGGCACCACGTACTCCTGCGTCGGAGTTTTCCAGCACGGGAAA 23410 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || ||||| ||||| || ||||| ||| | ||||| || || ||| | || ||| Sbjct 23411 GTGGAGATTATCGCCAACGACCAAGGCAACCGCACTACACCGAGCTACGTTGCCTTTACG 23470 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||||| | | || |||||||| || |||||| || ||||||| |||| Sbjct 23471 GACACTGAACGGCTTATCGGAGATGCAGCCAAGAATCAAGTGGCTATGAATCCTAACAAT 23530 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || || |||||||| || ||| | ||||| | | || |||| | || || ||| | Sbjct 23531 ACCATCTTTGATGCCAAGCGTCTCATTGGCCGCAAATTCGATGACCCTACGGTGCAGTCC 23590 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-C 550290 ||||||||||| |||||||||| | || | | |||| || || | | ||| | Sbjct 23591 GATATGAAGCACTGGCCTTTCCGTGTGGTGAGCGAAGCTGGGAAGCCCAAGGTGCAAGTC 23650 Query 550291 TACTCATGAAGGATCTGTTAAACAA-TTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349 | | |||| | || || || | || ||| ||||||| |||||||| || | Sbjct 23651 GAGT--ACAAGGGTGACACCAAGAACTTCTTTCCTGAAGAAATTTCCTCTATGGTATTGA 23708 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409 |||||||| ||| |||| |||| | |||| |||| | ||| ||||| | Sbjct 23709 CCAAAATGAAGGAAATAGCCGAGGCTTACCTGGGTCGCAAAGTCCAGAGTGCTGTAATTA 23768 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 ||||||| ||||| || |||||||| ||||||||||| || |||||||| || ||| Sbjct 23769 CTGTACCTGCATACTTCAATGACTCCCAACGTCAAGCCACCAAAGATGCAGGTACCATTA 23828 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 | || || || || | || || || ||||| || || |||||||| |||| ||||| Sbjct 23829 CAGGTCTCAACGTATTGCGCATCATTAATGAGCCGACGGCTGCTGCCATTGCCTATGGTT 23888 Query 550530 TTGATAAA 550537 | |||||| Sbjct 23889 TGGATAAA 23896 Score = 136 bits (150), Expect = 3e-26 Identities = 458/702 (65%), Gaps = 22/702 (3%) Strand=Plus/Plus Query 551899 TTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCT---TTCATCTGGTACTC 551955 |||| || || | || || || || ||||||||||| | || ||| || || | Sbjct 24120 TTCGACGGCTCCGCACAGCCTGTGAGAGAGCCAAACGTACCCTGAGTTCCTCC---ACCC 24176 Query 551956 AAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGA 552015 | | ||||||| | || ||||||||||| || ||||||| |||| | ||| | Sbjct 24177 AGGCTTCTATTGAGATTGACTCATTATTTGATGGCATTGATTTCTATACATCCATTACCC 24236 Query 552016 GGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAAC 552075 | || ||||| || | | | |||||||| | || ||||||| || || Sbjct 24237 GTGCTCGCTTTGAGGAGCTCAATGCGGATCTCTTCCGTGGTACTCTTGAACCTGTGGAGA 24296 Query 552076 AAGTTTTAAGAGATTCAAAGATTGATAAA-TCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 | | | | | ||| | ||| | || ||| || | || |||||||||| || |||||| Sbjct 24297 AGGCTCTTCGTGATGCTAAGCTAGACAAAGGACAGATTA-ATGAAATTGTTCTGGTTGGT 24355 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATGTT-----AAGTTCTTATTTCAATGGTA 552189 || || || | ||||| || || | ||| ||| ||| | || ||| ||||| | Sbjct 24356 GGCTCAACTCGTATTCCCAAGAT---CCAAAAGTTGCTCCAAGAT-TTCTTT-AATGGAA 24410 Query 552190 AAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAG 552249 || | |||| |||| | ||||| ||||| || || || ||||| || || | || | Sbjct 24411 AAGAGCTAAACAAAAGCATAAATCCTGATGAAGCCGTGGCATATGGCGCTGCTGTGCAGG 24470 Query 552250 CAGCTATTCT--TTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGT 552307 | |||||||| | |||||| | | ||||| | ||| | | | || | ||||| Sbjct 24471 CTGCTATTCTGATGGGTGACAAA-TCA-GAAAATGTGCAAGACCTCCTGCTGCTTGATGT 24528 Query 552308 TACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAG 552367 | || || ||||| ||| | || || | ||| ||| | |||||| | ||| | | Sbjct 24529 AGCACCACTTTCTCTGGGTATTGAGACCGCTGGTGGTGTGATGACTGCCTTAATCAAGCG 24588 Query 552368 AAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAAC 552427 || || |||||||| || || | | || |||| |||||||| || || | Sbjct 24589 CAACACAACTATTCCCACCAAGCAAACCCAGACCTTCACTACCTATTCAGACAACCAGAG 24648 Query 552428 TGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACT 552487 | ||| | ||| | | ||| || || ||| | || || || || |||| || Sbjct 24649 TAGTGTGCTGGTACAAGTGTATGAGGGTGAGAGAGCCATGACCAAGGACAACAATCTGCT 24708 Query 552488 TGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT 552547 || | ||| | | ||||||||| ||||| |||||||| || || |||||||| || Sbjct 24709 GGGCAAGTTTGACCTGACAGGTATTCCACCTGCACCTCGTGGTGTGCCCCAAATTGAGGT 24768 Query 552548 TACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 || ||||| || ||||| || || || | ||||| ||||| Sbjct 24769 GACATTCGACATAGATGCAAACGGTATCCTCAATGTTACTGC 24810 >seq1238 Length=809724 Score = 123 bits (136), Expect = 2e-22 Identities = 115/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 550392 TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTA 550451 |||| |||||||||| || || ||||| ||||| || ||||| || || ||||| || | Sbjct 800423 TTACAAATGCAGTAATCACAGTCCCAGCCTATTTCAACGACTCCCAGCGGCAAGCCACCA 800364 Query 550452 AAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTG 550511 |||||||||| ||||| ||||| ||||| ||||| || ||||| ||||| || || | Sbjct 800363 AAGATGCTGGCACCATTGCAGGACTCAATGTCCTTCGCATCATCAACGAACCCACAGCAG 800304 Query 550512 CTGCACTTGCATATGGACTTGATAAA 550537 | || |||| |||||||| |||||| Sbjct 800303 CAGCCATTGCCTATGGACTGGATAAA 800278 >seq7643 Length=26413 Score = 91.5 bits (100), Expect = 1e-12 Identities = 158/225 (70%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| ||||| || ||||| || || || ||| | ||| || ||||| |||| || Sbjct 24807 CCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGG--ATGTTGTAGTCAGAAAGG 24750 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || ||||| ||||| || | || ||||||||||||||||| Sbjct 24749 GTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATG 24690 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 ||||| || ||||| ||||| ||| || |||||| || ||| || | | || || Sbjct 24689 CCTTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCAATGGTGTCACTG-GGCTCCACCTC 24631 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || | || || ||||| | || || ||||| || ||||| Sbjct 24630 CAGGGTGATGGTCTTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4013621084120510