Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2566 138 1e-27 seq22 107 2e-18 >seq2566 Length=113286 Score = 138 bits (152), Expect = 1e-27 Identities = 108/129 (84%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 ||||||||||| |||| ||||||||||| || | || ||||||| ||||| ||| || Sbjct 13189 TCATCTCTACTGATCAGCTCATTAGAAAAAGTAAGCCCAGGCATTAGACCTCGTTTCTTC 13130 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||||||||||| |||||||| ||||||||||| || ||||||||||| ||||||||| Sbjct 13129 AGCCAAAATATTGACGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATGCT 13070 Query 37320 ACAAGACGT 37328 || | |||| Sbjct 13069 ACTACACGT 13061 Score = 96.9 bits (106), Expect = 4e-15 Identities = 107/141 (76%), Gaps = 4/141 (3%) Strand=Plus/Minus Query 36826 TTTAAAAATCTTCATCTAACGTAAATT--TTATTTCCTTATTACTATTCATAACTCCCAT 36883 |||| |||||| |||| || |||||| |||| | | | || ||| || ||||| Sbjct 14715 TTTAGAAATCTGCATCCAAAGTAAATGCGTTATCTGC--AGGACGTGACATCACACCCAT 14658 Query 36884 TTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATT 36943 ||||||||||||| || || |||| || ||||| ||||| ||||| || || ||||| Sbjct 14657 CCTTTGATATTCTCCTACACGCTTTTCAAAGAAATTAGTCTTGCCTTCCAGAGAGATATT 14598 Query 36944 TTCCATAAAATCAAATGGATT 36964 |||||||| ||||||||||| Sbjct 14597 CTCCATAAAGTCAAATGGATT 14577 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 37430 TTCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATT 37489 ||||| | ||| | || ||||||||||| ||||||||||||||||| || ||||| || Sbjct 11702 TTCTTTAGAATCCTTAATGTAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGTT 11643 Query 37490 TTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTG 37537 || || || ||||| || ||||| ||||| | ||||| | || ||| Sbjct 11642 CTCCATGGCAATCTGGAAGCCATAGAAACAGCGTGCTTCTGTTACTTG 11595 >seq22 Length=1337131 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||||||||| || || | ||| || || || || | ||||||||||| ||||| || | Sbjct 639710 CTTCATCTCTGCTAATAAGTTCGTTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCT 639769 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | ||||||||| |||||||||| ||||||||||| || ||||| || || ||||| | Sbjct 639770 TGAGCCAAAATATGGCTGCAAAAGCACCAGAAAAGAAGATGCCTTCTACAGCAGCAAACG 639829 Query 37318 CTAC 37321 | || Sbjct 639830 CAAC 639833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590122273659960