Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq555 138 2e-27 seq87445 127 4e-24 seq5953 118 2e-21 seq4627 114 2e-20 seq51722 104 4e-17 seq486 95.1 2e-14 >seq555 Length=396523 Score = 138 bits (152), Expect = 2e-27 Identities = 174/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||| ||||| | | || ||| || || | ||| || || || || |||||||| | Sbjct 220331 GCTGGCAGCCGTTGTTCACGTGGTTCATTACTTTCTGCTTCAGCTGCGCTACCTGGTCTC 220390 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 | || || || || || |||||||| ||||| || ||| | |||||| || | Sbjct 220391 GGAGCGCGCTGGCAGTGTTAGACAGTCCCGCGTTCTCGTTCTTTAAGCTCTTCACCTTGT 220450 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 |||||||||| |||||||| ||||| || | | | |||||||||||| |||| ||||| Sbjct 220451 CCTCCAGCCGAGCGATGCGCTCCAGCTTCCTCTTCCTGCATTTGGTGGCGGCCAGGCGGT 220510 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 | || || | || | ||| |||||||||| |||||||| ||||||| || |||||| Sbjct 220511 TGCGCAGCCGTTTCCTCTCCACCTTGATGCGCTCCTGGTCTTCCATGTTAATGGGAGAC 220569 >seq87445 Length=486 Score = 127 bits (140), Expect = 4e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 ||| |||| || |||||||||||||| | |||||| || | ||| ||||||||| | Sbjct 43 CCTCTGCTGACCGGGCTGCCCTGGTAGGTCTCGTAGGGCCCGTCTTCCCTGGCCAGCTGG 102 Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 ||| |||| |||||| |||||||||||| || || |||| | ||||||| || | Sbjct 103 CAGCTGGCCTCCAGGGCCCAGTAGTAGATGGTCTCGAAGATCTGCTGGTTGAGCAGCTGG 162 Query 213261 GCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACC 213320 ||||| ||| | |||||| | | ||||| | ||| | || ||||| ||||| ||| Sbjct 163 GCCTCGGGGCTCTCGAAGGGGAACCTCATGAGGATGAAGGCGTCGGCCAGGCCCTGCACC 222 Query 213321 CCGATGCCGATGGGTCTGTG 213340 || ||||| ||||| | ||| Sbjct 223 CCAATGCCAATGGGGCGGTG 242 >seq5953 Length=84152 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 || || | ||| ||||| || |||||||| ||||| || | | || || || |||| Sbjct 62274 AGCACTTTCTGCTTGAGCTGCGCCACCTGCTCCCGGAGGAGGTTGGCCGTCGAGGCCAGT 62333 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | |||||| ||| ||||| || ||||| || | |||||| ||||| Sbjct 62334 TCGGTGTTCTGGTTCTTGAGGCTCTTGACTTTTTCTTCCAGGCGGGAGATGCGCTCCAGC 62393 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 || ||||| || || |||| ||| || | |||||| || || | ||| || || |||||| Sbjct 62394 TTCCGCCGCCGACACTTGGAGGCCGCGATGCGGTTGCGCAGCCGCTTGCGCTCTGCCTTG 62453 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||||| ||||| ||||||||||| || ||| Sbjct 62454 ATGCGCTCCTGCGTGTCCATGTCGATGGGCGAC 62486 >seq4627 Length=64116 Score = 114 bits (126), Expect = 2e-20 Identities = 93/113 (82%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||| Sbjct 18712 GTGTACTCCACAATCTCGGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGG 18771 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTC 213640 || ||| |||| || |||||||||||||||||||| | ||| ||||| Sbjct 18772 TTGCTCTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 18824 Score = 96.9 bits (106), Expect = 6e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 213821 CATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCAC 213880 |||||| |||||||||| ||| || ||| ||| ||||||| || ||| ||| ||| Sbjct 20685 CATGAAGAGGTCCGGGATCCAGAGGGCGTAGAAAAGGTCCCGGGCTCTCTGCTCCTCCTT 20744 Query 213881 TCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTA 213940 || | ||| || || || || || ||||||||||| |||||| ||||||| ||| Sbjct 20745 CCCGGTGTTCTTCTTCAAGTCGAGGAACTCAAAGATGTCGAAGTGCCAGGGCTCCAGGTA 20804 Query 213941 GATGGCAAAGGCGCCCGGCCTCT 213963 |||||| ||||| || || |||| Sbjct 20805 GATGGCGAAGGCCCCGGGTCTCT 20827 >seq51722 Length=789 Score = 104 bits (114), Expect = 4e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 212915 TATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGAT 212974 || |||||| || || ||||| |||| | ||| | ||| ||||||||||| | Sbjct 137 TACCTGGAACTCCCCCGAGAGAACCCGGCGGGTGTAGATGTTGCTGGTGTAGGGCTCCAC 78 Query 212975 GCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAG 213034 | ||| ||||||||||||||||| || ||| ||| |||||||| || ||||||||||| Sbjct 77 GGACTCATTGTTCCCCAGAATCTGAGCCGTGGAGGCCGTGGGCATCGGGGCCACCAGGAG 18 Query 213035 ACTGTTCCTCACTCCGT 213051 |||||||| || |||| Sbjct 17 GCTGTTCCTGACCCCGT 1 >seq486 Length=783293 Score = 95.1 bits (104), Expect = 2e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 241490 TTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCAT 241549 |||||| | || ||||||||||||| || |||||||| ||||| |||||||||||||| Sbjct 308585 TTGAGCGCTTTGACTTTCTCCTCCAAGCGGGCGATGCGCTCCAGCTTGCGCCGGCGGCAC 308526 Query 241550 TTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGG 241606 |||| || || | ||||| || ||||| || || || || || | ||| || ||| Sbjct 308525 TTGGAAGCCGCGATACGGTTGCGCAGTCTTTTGCGCTCAGCTTTCAGGCGCTCTTGG 308469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928081482620160