Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq392 190 2e-43 seq1593 123 3e-23 >seq392 Length=717314 Score = 190 bits (210), Expect = 2e-43 Identities = 646/996 (65%), Gaps = 19/996 (2%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||| ||| | ||| || |||||||| || | || || |||| ||| || || | Sbjct 24279 TGTCTCGTAAATGCTCTTCCAGACACTGAATTGCAAAAGGATCAATGTCAGTATCAAACT 24220 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 | || || || | ||| || ||| ||| ||||| || |||||| || || | Sbjct 24219 TGTTGGCAAAAAAATGATGC---TTCCGTAACATCCAACTCAAGTCTCCCACTCCAAAGA 24163 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | || || ||||| | ||| || || ||||||| ||||| |||| || || | || | Sbjct 24162 CACATACAGAACGGACGTGAACTCCACTGCAAGGTGGGTAAGGAGCACCCTTGGATACAT 24103 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 | || || |||| |||||||||||||||| || | || | ||| ||||| |||| Sbjct 24102 CCCCCTCAAAGTAATGCCACTTCACAAACCGAGCAACGGCATTCATATCGGAAACATCGT 24043 Query 160285 ATTTGTACATCAGGGGA-ACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 |||||| || | || || ||||| ||||| | || || ||||| | || ||||| Sbjct 24042 ATTTGT-CACTGGCAGAGACTGCACCAGGAACTTCAGGGATTCGCTGAATTGTAGCCCAT 23984 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 | | ||| || || ||||||||||| |||| |||||| || || | | ||| ||| Sbjct 23983 AAATATTCATCAGGACTGTACGTGTCTTTAGCCCATTCTATAAAAGCACGAATTTTGCTG 23924 Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463 | | | || | || | || || || ||||| || || || || ||||| Sbjct 23923 TTCTCTAATACATATTCCACAAATTCCCTAGTAACAACAAAATAGGCACTTCCAGAGAAA 23864 Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCG-GTGTTAGACACCACTCCTTT 160522 || ||| || | ||| || | ||| | || | | | || ||| || | Sbjct 23863 ATGGGTGTGTTGAGAGGTGGATGCTGTTTAT-CTATCTGCATATTTTTTACCTTGCCATC 23805 Query 160523 CACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTC 160582 || | | | || | |||||||| || ||| |||| | ||||| |||||| || Sbjct 23804 AACTACCTCATGATGTTTCTTCCATCTCACCTCTTTGTTTGAAGGCATTTTTTCCGTTTC 23745 Query 160583 TAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAG 160642 || ||| || |||||| ||| | ||||| || || || || ||| | || ||||||| Sbjct 23744 TAAACTATTTTCACCGTTGAGGGCTTTCAACTTCTCCACAATTTCTTGATTTGTCTTGAT 23685 Query 160643 CGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGC-- 160700 || || || | || || | || |||| ||||||||| | | || || ||| Sbjct 23684 TGGGAAATCCATGCCACAGAGATTGATCAAGTACTTCCAGCTAACATTC--CTCCTGCAG 23627 Query 160701 AGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTC 160760 || ||| ||||||| || | || || || || |||||||| || || |||||||| | Sbjct 23626 AGATCCTTCATGCAGTTGAGGTCAGCTTGTACCCGGCTCCATGATGCATACACTACACTT 23567 Query 160761 TCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCC 160817 || | || ||||| | ||||| || | ||||| || | || || || | ||| Sbjct 23566 TCCAATTGGCTGGCAATGAAGACATTGTGAAAACATGATGCAATCCCTTTTACAGCTGCC 23507 Query 160818 -AGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGC 160876 ||||||| || | |||| ||| || || | ||| || ||| ||||| || Sbjct 23506 AAGAAAGA----CTCTGGGGACTTTTTGTCAACATGAATGCAGTAATAGTTTTGAGGAGC 23451 Query 160877 GTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTA 160936 ||| |||| || || | ||||| | ||| | || |||||||| ||| || || || Sbjct 23450 GTATATGGTTCTCAGAAGTCTCTCAAGCATATTAATTTTATGATGAGCCACAATTGAATA 23391 Query 160937 GGCTATCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTT 160996 || || ||||| || | || || | || || | | | | || || || |||| Sbjct 23390 TGCAATGGGAAATTCTGCTTCTTCTTGGCTAAGAGGTTCCATAATATATTTCTGCCTCTT 23331 Query 160997 GATAAAATAATCACAATCCCGCGTCATGTTGATATA 161032 ||||| | |||||| |||||||||||||| Sbjct 23330 AATAAAGGAGGCACAATTAACTGTCATGTTGATATA 23295 >seq1593 Length=250849 Score = 123 bits (136), Expect = 3e-23 Identities = 229/335 (68%), Gaps = 1/335 (0%) Strand=Plus/Plus Query 160615 GCTTG-ACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACG 160673 ||||| ||||||||| ||| ||||||| || || ||||| || || ||| | | | Sbjct 87176 GCTTGGACGATCTCTCTGTTTGTCTTGATTGGGAAATCGGTCCCACAGGTGTTCAGGAGG 87235 Query 160674 TACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACG 160733 ||| |||| | | | | |||||||| ||||||| || | || || || || Sbjct 87236 TACCTCCAACGCACCTTGCTTTGAAGCAGGTCCTTCATGCAGTTCAGGTCAGCTTGGACC 87295 Query 160734 CGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAA 160793 | ||| || || ||||| ||| |||| | ||| |||| ||| || || ||||| Sbjct 87296 CTCGACCAAGAGGCATACACCACGCTCTCCTGCTTAGAAGCCAGAAAAACATTGTCGAAG 87355 Query 160794 CACGACACGATTCCCACCACCGCCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGC 160853 || || || || ||| || || ||| | ||| | || | ||||||||| Sbjct 87356 CAGGAGACAATGCCCTGAACGGCTTTTTGGAAAAGCTTGGGAGATTTGCTGTCCACGTGG 87415 Query 160854 ACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATC 160913 || || || | ||||||||| || ||||||| || || ||||| ||||||||||| ||| Sbjct 87416 ACACAGTATACGTTCTGAGGAGCAAAGATGGCTCTTAGTAACCTTTCGAACATCTCAATC 87475 Query 160914 TTATGATGGATCACGATAGAGTAGGCTATCGGAAA 160948 || | ||||||||| || || || || || || || Sbjct 87476 TTCTCATGGATCACCATGGAATAAGCAATAGGGAA 87510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 575080610079240