Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq7643 91.5 3e-13 >seq7643 Length=26413 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| || ||||| | || | || | ||| | ||| || ||| || || ||| Sbjct 24815 ATGCCACCCCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCA 24756 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | || || ||||||||||| || ||||| |||||||| Sbjct 24755 GAAAGGGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGA 24696 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| ||| || || || | || | || Sbjct 24695 GGAATGCCTTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCC 24636 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || |||||||| || || | || |||||||| Sbjct 24635 ACCTCCAGGGTGATGGTCTTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586 Score = 87.8 bits (96), Expect = 4e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| || ||||| | || | ||| | || | ||| || ||| || || || Sbjct 24587 ATCCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 24528 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| || || ||||||||||| | |||||||| || || Sbjct 24527 GAAAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGA 24468 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || || ||||| || | ||| | || Sbjct 24467 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTTGGCTCC 24408 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || ||||| || ||||| || ||||| || || || | ||| ||||||||||| Sbjct 24407 ACCTCTAGGGTGATGGTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCATTTT 24355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980741326753650