Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq18400 176 5e-38 seq2001 167 3e-35 seq9062 158 1e-32 seq4627 107 2e-17 seq1416 105 8e-17 seq51722 86.0 8e-11 >seq18400 Length=2326 Score = 176 bits (194), Expect = 5e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||||||| ||| || ||||||||||| ||||||||||| || | | || Sbjct 1608 GCTTGGCCAGTTCGCCGGGCAGGAGGAGGCGCACGGCCGTCTGGATCTCCCGGGAGGTGA 1667 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| ||||||| ||||||| |||| | Sbjct 1668 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGGGAAGCCTCGGCCGCGATGCGCTCGAAGA 1727 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 1728 TGTCGTTGACGAAGGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 1787 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 1788 GGACCTGCTTCAGCACCTTGTA 1809 >seq2001 Length=193380 Score = 167 bits (184), Expect = 3e-35 Identities = 158/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||||||| ||| | ||||||||||| ||||||||||| || | | || Sbjct 168695 GCTTGGCCAGTTCGCCGGGCAGCAGGAGGCGCACGGCCGTCTGGATCTCCCGAGAGGTGA 168754 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| ||||| ||||||| |||| | Sbjct 168755 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGGGACGCCTCCCCCGCGATGCGCTCGAAGA 168814 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||||| |||||||| Sbjct 168815 TGTCGTTGACGAAGGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCCGTGTCGGGGT 168874 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 168875 GGACCTGCTTCAGCACCTTGTA 168896 >seq9062 Length=25048 Score = 158 bits (174), Expect = 1e-32 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||||| ||||| |||||||||||||| | | || Sbjct 8747 GCTTGGCCAGCTCGCCGGGCAGCAGGAGGCGAACGGCCGTCTGGATCTCGCGGGAGGTGA 8688 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| ||||||| ||||||| |||| | Sbjct 8687 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGGGAAGCCTCGGCCGCGATGCGCTCGAAGA 8628 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||||||| Sbjct 8627 TGTCGTTGACGAAGGAGTTCATGATACTCATGGCCTTGGAAGAGATGCCGGTATCGGGGT 8568 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 8567 GGACCTGCTTCAGCACCTTGTA 8546 Score = 158 bits (174), Expect = 1e-32 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||||| ||||| |||||||||||||| | | || Sbjct 20824 GCTTGGCCAGCTCGCCGGGCAGCAGGAGGCGAACGGCCGTCTGGATCTCGCGGGAGGTGA 20765 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| ||||||| ||||||| |||| | Sbjct 20764 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGGGAAGCCTCGGCCGCGATGCGCTCGAAGA 20705 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||||||| Sbjct 20704 TGTCGTTGACGAAGGAGTTCATGATACTCATGGCCTTGGAAGAGATGCCGGTATCGGGGT 20645 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 20644 GGACCTGCTTCAGCACCTTGTA 20623 >seq4627 Length=64116 Score = 107 bits (118), Expect = 2e-17 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1628167 ACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226 || ||||||||||| |||||| || | | || |||||||||||||||||| | || Sbjct 18721 ACAATCTCGGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTC 18780 Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACG 1628286 ||||| || |||||||| |||||||||||||| || ||||| |||||| | | | | Sbjct 18781 CGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGCGACTCAATG 18840 Query 1628287 ATGGCCGACCAGATCTG 1628303 ||||| |||||| ||| Sbjct 18841 ATGGCGTACCAGAGCTG 18857 Score = 100 bits (110), Expect = 3e-15 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 1630175 CGGCAAAGCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGT 1630234 |||| | ||||| || || || |||||||||||||| ||||| || || |||||||||| Sbjct 24694 CGGCCACCCCGATTCCCCCCGCGGACTTGGAGATGAGTGCGCAGTGCTTCAGCGTGTCGT 24753 Query 1630235 AGATGCCCTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCA 1630277 ||||||||||||| |||| |||||||| || ||| ||||| Sbjct 24754 AGATGCCCTCGATGCTGTCGTCCTTCATGCACAGGAGGAAGCA 24796 Score = 86.0 bits (94), Expect = 8e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| |||||||| |||| || ||||| || ||||| || || | | ||||||||| Sbjct 20685 CATGAAGAGGTCCGGGATCCAGAGGGCGTAGAAAAGGTCCCGGGCTCTCTGCTCCTCCTT 20744 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 ||| |||||| || | |||||| | || | |||||| |||||| ||||||||||| Sbjct 20745 CCCGGTGTTCTTCTTCAAGTCGAGGAACTCAAAGATGTCGAAGTGCCAGGGCTCCAGGTA 20804 Query 1628568 GCAGGCAAAGGCGCC 1628582 | ||| ||||| || Sbjct 20805 GATGGCGAAGGCCCC 20819 >seq1416 Length=401889 Score = 105 bits (116), Expect = 8e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 512051 GTCATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACACC 512110 ||||||||||| |||||| ||||||||||| |||||||||| || ||| | ||||||| Sbjct 338437 GTCATCTCCTTCGACGGCTCCTACGTCAACTACCGCCACTTGGCCCTGCTCTGCGACACC 338496 Query 512111 ATGTGCTGCCGCGGATCGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGC 512161 ||| ||| ||||| || ||||| ||||||| |||||| |||||||| Sbjct 338497 ATGACCTGTCGCGGGCATTTGATGGCCATCACGCGGCACGGCGTCAACCGC 338547 >seq51722 Length=789 Score = 86.0 bits (94), Expect = 8e-11 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1627348 AAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCACGC-CTC 1627406 || || |||||||| || ||||| |||||||||||| ||||| | ||| |||| ||| Sbjct 130 AACTCCCCCGAGAGAACCCGGCGGGTGTAGATGTTGCTGGTGTAGGGCTC-CACGGACTC 72 Query 1627407 GGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAG 1627460 |||| ||||| ||||| | ||| | |||||||||||| | ||||| ||||| Sbjct 71 ATTGTTCCCCAGAATCTGAGCCGTGGAGGCCGTGGGCATCGGGGCCACCAGGAG 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6082815310023483