Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq7643 105 6e-18 >seq7643 Length=26413 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || |||| || || || || || || || || || ||| Sbjct 24585 GATGCAGATCTTCGTGAAGACCTTAACTGGGAAGACCATCACCCTGGAGGTGGAGCCCAG 24644 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| ||| | ||| ||||||||||| ||||| || ||||| |||| Sbjct 24645 TGACACCATTGAGAACGTCAAAGCCAAA-ATCCAAGACAAGGAAGGCATTCCTCCTGATC 24703 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | ||||||||||| || || ||||| || ||| | | | | || || || | Sbjct 24704 AGCAGAGGTTGATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACCCTTTCTGACTACA 24763 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||| || ||||| || || || ||| | || |||| || | || ||| Sbjct 24764 ACATCCAGAAGGAGTCCACTCTCCACCTTGTCCTGCGTCTGAGGGGTGGC 24813 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || || || || || || || || || | | Sbjct 24358 ATGCAGATCTTTGTGAAGACTTTGACTGGCAAGACCATCACCCTAGAGGTGGAGCCAAGT 24417 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| ||||| || ||||| || ||| Sbjct 24418 GATACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAA 24477 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | | || || || ||| Sbjct 24478 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCCGACTACAAC 24537 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || ||||| || || || || |||| Sbjct 24538 ATCCAGAAGGAGTCCACCCTCCATCTTG 24565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448230735015720