Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq18400 228 1e-53 seq9062 215 8e-50 seq2001 206 4e-47 seq1416 109 9e-18 seq4627 105 1e-16 >seq18400 Length=2326 Score = 228 bits (252), Expect = 1e-53 Identities = 197/244 (81%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| ||||||||||| ||||| ||||| |||||||||||| |||||||||||||| ||| Sbjct 1569 TGTATTTGGTGACGGCTTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGTTCGCCGGGCA 1628 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||||||||| ||||||||||| |||| | ||| ||| ||||||||| | Sbjct 1629 GGAGGAGGCGCACGGCCGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAGT 1688 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| ||||||| ||||||| |||| ||||||||||| || ||||||| Sbjct 1689 GGGCCAGGCGGGAAGCCTCGGCCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 1748 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| ||||||||| |||||||| |||||||||| Sbjct 1749 TGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 1808 Query 1485710 AAAC 1485713 | || Sbjct 1809 ACAC 1812 >seq9062 Length=25048 Score = 215 bits (238), Expect = 8e-50 Identities = 194/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||| ||||| ||||| |||||||||||| ||||||| |||||| ||| Sbjct 8786 TGTACTTGGTGACGGCTTTGGTCCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 8727 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||| ||||| |||||||||||||||| | ||| ||| ||||||||| | Sbjct 8726 GCAGGAGGCGAACGGCCGTCTGGATCTCGCGGGAGGTGATGGTGGAGCGCTTGTTGTAGT 8667 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| ||||||| ||||||| |||| ||||||||||| || ||||||| Sbjct 8666 GGGCCAGGCGGGAAGCCTCGGCCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 8607 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| |||||||| |||||||| |||||||||| Sbjct 8606 TGATACTCATGGCCTTGGAAGAGATGCCGGTATCGGGGTGGACCTGCTTCAGCACCTTGT 8547 Query 1485710 AAAC 1485713 | || Sbjct 8546 ACAC 8543 Score = 215 bits (238), Expect = 8e-50 Identities = 194/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||| ||||| ||||| |||||||||||| ||||||| |||||| ||| Sbjct 20863 TGTACTTGGTGACGGCTTTGGTCCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 20804 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||| ||||| |||||||||||||||| | ||| ||| ||||||||| | Sbjct 20803 GCAGGAGGCGAACGGCCGTCTGGATCTCGCGGGAGGTGATGGTGGAGCGCTTGTTGTAGT 20744 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| ||||||| ||||||| |||| ||||||||||| || ||||||| Sbjct 20743 GGGCCAGGCGGGAAGCCTCGGCCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 20684 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| |||||||| |||||||| |||||||||| Sbjct 20683 TGATACTCATGGCCTTGGAAGAGATGCCGGTATCGGGGTGGACCTGCTTCAGCACCTTGT 20624 Query 1485710 AAAC 1485713 | || Sbjct 20623 ACAC 20620 >seq2001 Length=193380 Score = 206 bits (228), Expect = 4e-47 Identities = 192/244 (79%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| |||||||| || || || ||||||||| |||||||||||||| ||| Sbjct 168656 TGTATTTGGTGACCGCCTTGGTGCCTTCCGACACGGCGTGCTTGGCCAGTTCGCCGGGCA 168715 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||||| ||||||||||| || | | ||| ||| ||||||||| | Sbjct 168716 GCAGGAGGCGCACGGCCGTCTGGATCTCCCGAGAGGTGATGGTGGAGCGCTTGTTGTAGT 168775 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| ||||| ||||||| |||| ||||||||||| || ||||||| Sbjct 168776 GGGCCAGGCGGGACGCCTCCCCCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 168835 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||||| ||||||||| |||||||| |||||||||| Sbjct 168836 TGATGCTCATGGCCTTGGAGGAGATGCCCGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 168895 Query 1485710 AAAC 1485713 | || Sbjct 168896 ACAC 168899 >seq1416 Length=401889 Score = 109 bits (120), Expect = 9e-18 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 434127 GTGATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACACC 434186 || |||||||| |||||| ||||||||||| |||||||||| || ||| | ||||||| Sbjct 338437 GTCATCTCCTTCGACGGCTCCTACGTCAACTACCGCCACTTGGCCCTGCTCTGCGACACC 338496 Query 434187 ATGTGCTGTCGCGGCTCGGTGGTGGCCGTCACGCGGCACGGCTTCAACCG 434236 ||| ||||||||| || ||||| |||||||||||||| ||||||| Sbjct 338497 ATGACCTGTCGCGGGCATTTGATGGCCATCACGCGGCACGGCGTCAACCG 338546 >seq4627 Length=64116 Score = 105 bits (116), Expect = 1e-16 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 2071584 CTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTT 2071643 ||||||||| |||||| || | ||||||||||||||||||||||||| || |||| Sbjct 18726 CTCGGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCGGTT 18785 Query 2071644 GACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGGC 2071703 | || |||||||| ||||||||||||| |||||||| |||||| | | |||||| Sbjct 18786 GCAGGAGTCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGCGACTCAATGATGGC 18845 Query 2071704 CGACCA 2071709 |||| Sbjct 18846 GTACCA 18851 Score = 87.8 bits (96), Expect = 3e-11 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 2073650 CGGCAAAGCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGT 2073709 |||| | ||||| || || || | |||||||||||| ||||| | |||||||| |||| Sbjct 24694 CGGCCACCCCGATTCCCCCCGCGGACTTGGAGATGAGTGCGCAGTGCTTCAGCGTGTCGT 24753 Query 2073710 AGATGCCCTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCA 2073752 ||||||||||||| |||| |||||||| || || ||||| Sbjct 24754 AGATGCCCTCGATGCTGTCGTCCTTCATGCACAGGAGGAAGCA 24796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7884717086494161