Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq7643 131 1e-25 seq25499 86.0 5e-12 >seq7643 Length=26413 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||| |||||| || | || || ||||| || || || ||||| || || | | Sbjct 24812 CCACCCCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 24753 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || |||||| | ||||| || |||||||| || ||| Sbjct 24752 AGGGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGAGGA 24693 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | ||| |||||| | || | |||||| | || || Sbjct 24692 ATGCCTTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCCACC 24633 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || ||||||||||| || || || |||||||| Sbjct 24632 TCCAGGGTGATGGTCTTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||| |||||| || | ||| || ||||| || || || ||||| || || | | Sbjct 24584 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 24525 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || |||||| | |||| || || || || || ||| Sbjct 24524 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGAGGA 24465 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || || ||| | || | || ||| | || || Sbjct 24464 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTTGGCTCCACC 24405 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || || |||||||| || || || ||||| ||||||||||| Sbjct 24404 TCTAGGGTGATGGTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCATTTT 24355 >seq25499 Length=1430 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/228 (69%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| | |||| || | ||| || ||||||| ||| | ||| | || || | Sbjct 162 CCTCCCCTCAGATGCAGGACAAGATGGAGGATGGATTCCTTTGGGATGCTGTAGTCAGAG 221 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | | ||||| ||| || || || || | |||| | |||| || || || || |||||| Sbjct 222 AGGATGCGATCATCTTCCAGCTGCTTTC-AGCAAAGATCAGCCTCTGTTGGTCTGGCGGA 280 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || || || ||| || | |||| | |||| |||||| ||| | Sbjct 281 ATGCCTTCCTTATCCTG-AATCTTGGCATTGAGATTTTCAGTGGTGTCACCGGGTTTCAA 339 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || ||||||||||| || | || |||||||| Sbjct 340 CTCCAGGGTGATGGTCTTCCCAGTTAAGGTATTGATGAAGATCTGCAT 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383827648487259