Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq184 403 1e-106 seq1740 102 6e-16 seq964 100 2e-15 seq488 93.3 3e-13 seq1186 89.7 4e-12 seq3411 86.0 5e-11 >seq184 Length=633779 Score = 403 bits (446), Expect = 1e-106 Identities = 975/1460 (67%), Gaps = 22/1460 (2%) Strand=Plus/Minus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 |||||| || ||||| || || ||| ||| || || | ||||| ||||| || Sbjct 24856 ATTAGTTATTGTAATCTTGTTCTCTTTTCCTGTGCTCTTGTCCACTGCAGTAACATTGAG 24797 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 ||||| || ||||| | || ||||| || |||||||| || || || | | ||||| Sbjct 24796 GATACCGTTTGCATCTATGTCGAATGTCACCTCAATTTGGGGCACACCACGAGGTGCAGG 24737 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||| || ||| || | ||| | ||||| ||| || || || || | || || Sbjct 24736 TGGAATACCTGTCAGGTCAAACTTGCCCAGCAGATTGTTGTCCTTGGTCATGGCTCTCTC 24677 Query 281560 ACCCTCGAAAATTTGGAT-AGTA-ACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 |||||| | | ||| | || | ||||| | || || |||||||| || || || | Sbjct 24676 ACCCTCATACACTTGTACCAGCACACTAC--TCTGGTTGTCTGAATAGGTAGTGAAGG-T 24620 Query 281618 CTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 |||| ||| || ||||| |||||||| | | || | ||||| | |||||| Sbjct 24619 CTGGGTTTGCTTGGTGGGAATAGTTGTGTTGCGCTTGATTAAGGCAGTCATCACACCACC 24560 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 ||| || || | ||| |||||||| || | ||||||| || | | | ||| | || Sbjct 24559 AGCGGTCTCAATACCCAGAGAAAGTGGTGCTACATCAAGCAGCAGGAGGTCTTGCACATT 24500 Query 281737 TTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 ||| | | || | ||| | |||||||| || || | |||||| |||||||| || |||| Sbjct 24499 TTC-TGATTTGTCACCCATCAGAATAGCAGCCTGCACAGCAGCGCCATATGCCACGGCTT 24441 Query 281796 CATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGT 281854 |||||||||| | ||| ||||| | ||| ||||| || |||| ||| | || || | Sbjct 24440 CATCAGGATTTATGCTTTTGTTTAGCTCTTTTCCATTAAAGAAATCTTGGAGCAACTTTT 24381 Query 281855 CTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 281914 | ||| |||||||||| ||| || ||||| | |||||||||| | |||| ||| Sbjct 24380 GG-ATCTTGGGAATACGAGTTGAGCCACCAACCAGAACAATTTCATTAATCTGTCCTTTG 24322 Query 281915 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCT 281974 || || || | ||| | | | || || || ||||||||| | | | || | || Sbjct 24321 TCTAGCTTAGCATCACGAAGAGCCTTCTCCACAGGTTCAAGAGTACCACGGAAGAGATCC 24262 Query 281975 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAAC 282034 | | || || || || ||| | |||| | || ||||||| || || || Sbjct 24261 GCATTGAGCTCCTCAAAGCGAGCACGGGTAATGGATGTATAGAAATCAATGCCATCAAAT 24202 Query 282035 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 282094 || || |||| ||||| | || || || || ||| || | |||||| || | ||| Sbjct 24201 AATGAGTCAATCTCAATAGAAGCCTGGGTGGAGGAACTCAGGGTACGTTTGGCTCTCTCA 24142 Query 282095 CATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTT--TTATATT 282152 || ||||| | || | ||| | ||| ||| |||| ||| | |||| | Sbjct 24141 CAGGCTGTGCGGAGCCGTCGAACTGCTC--GCTTATTGCCAGCAATGTCACGCTTATGCT 24084 Query 282153 TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCA 282212 | | |||||| || || ||| | | || | ||||| ||||| || || || |||| Sbjct 24083 TGCGCTTGAATTCCTCCACAAAGTGACTCACCATGCGATTGTCAAAGTCCTCCCCACCCA 24024 Query 282213 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 282272 | | |||| ||| | |||| | | |||| || | |||||||||| | ||||| | Sbjct 24023 AGTGGGTATCTCCAGCAGTAGATTTCACTTCAAAGATGCCATCTTCAATGGTCAAAATGG 23964 Query 282273 TAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG- 282331 ||||||| || |||||||||| ||||| || ||||||||| | || || | Sbjct 23963 AAACATCAAATGTGCCACCACCCAAGTCAAAGATCAGTACATTCTTCTCACCTGCTCTGC 23904 Query 282332 -----TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 282386 |||||||| | |||||| |||| |||||||| || || |||||||| || | || Sbjct 23903 TCCCTTTTTTATCCAAACCATAGGCAATGGCAGCAGCCGTCGGCTCATTAATGATGCGCA 23844 Query 282387 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 282446 | || || ||||| | ||| | ||||||||||| |||||||| | ||| || || || | Sbjct 23843 ATACGTTGAGACCTGTAATGGTACCTGCATCTTTGGTGGCTTGACGTTGGGAGTCATTGA 23784 Query 282447 AATATGCAGGAACAGTAATAACGGCA-TCTGTTACTTCTTTTCCAATATAAGCGCTTGCT 282505 | |||||||| |||||||| || ||| |||| |||| || | ||||| ||| Sbjct 23783 AGTATGCAGGTACAGTAATTACAGCACTCTG-GACTTTGCGACCCAGGTAAGCCTCGGCT 23725 Query 282506 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGAT 282565 ||| |||||||| | || | ||| || ||||||| ||| ||| | | | ||||| Sbjct 23724 ATTTCCTTCATTTTGGTCAATACCATAGAGGAAATTTCTTCAGGAAAGAAGTTCTTGGTG 23665 Query 282566 TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGC 282625 ||| | || |||| | | || || | | | | | || || ||| Sbjct 23664 TCACCCTTGTACTCGACTTGCACCTTGGGCTTCCCAGCTTCGCTCACCACACGGAAAGGC 23605 Query 282626 CAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTT 282685 || | |||||||| || || || | |||||| || | | ||||| | || || Sbjct 23604 CAGTGCTTCATATCGGACTGCACCGTAGGGTCATCGAATTTGCGGCCAATGAGACGCTTG 23545 Query 282686 GCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATC 282745 |||||||| || |||||| | ||||| | || |||||| |||||||||||||| || Sbjct 23544 GCATCAAAGATGGTATTGTTAGGATTCATAGCCACTTGATTCTTGGCTGCATCTCCGATA 23485 Query 282746 AGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTC 282805 || |||| || || ||||| | ||| || || || ||||| || ||||| || || Sbjct 23484 AGCCGTTCAGTGTCCGTAAAGGCAACGTAGCTCGGTGTAGTGCGGTTGCCTTGGTCGTTG 23425 Query 282806 GCAATAATTTCAACTTTACC 282825 || ||||| || ||||| || Sbjct 23424 GCGATAATCTCCACTTTCCC 23405 >seq1740 Length=166013 Score = 102 bits (112), Expect = 6e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||||| |||| ||||| |||||||| || |||||||||| | ||| Sbjct 125346 TTTTTGTCCAAGCCATAAGCAATCGCAGCTGCAGTTGGCTCGTTAATAATTCGGAGCACA 125287 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || |||||||| ||||||||||||| ||||| || | || || || || || || Sbjct 125286 TTGAGGCCAGCAATGGTTCCTGCATCTTTCGTGGCCTGGCGCTGAGAGTCATTGAAGTAA 125227 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480 || || || || | ||||||| ||| || Sbjct 125226 GCTGGGACTGTGACCACGGCATTTGTAAC 125198 Score = 98.7 bits (108), Expect = 7e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | || || |||| ||||| |||||||| ||||||||||||| | ||| Sbjct 126295 TTTTTGTCCAAGCCGTAAGCAATCGCAGCTGCAGTTGGCTCATTAATAATTCGGAGCACA 126236 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || |||||||| |||| |||||||| ||||| || | || || || || || || Sbjct 126235 TTGAGGCCAGCAATGGTTCCGGCATCTTTCGTGGCCTGGCGCTGAGAGTCATTGAAGTAA 126176 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480 || || || || | ||||||| ||| || Sbjct 126175 GCTGGGACTGTGACCACGGCATTTGTAAC 126147 Score = 89.7 bits (98), Expect = 4e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 |||||| |||||| ||||| || || ||||||||||| | |||||| ||||||||||| Sbjct 129095 TTATCAACGGCAGAAACATTGAGGATGCCATTGGCATCAATATCAAAGGTGACTTCAATC 129036 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 281508 |||||||| ||||| |||| || || || || Sbjct 129035 TGAGGGACACCTCTGGGAGCTGGAGGAATGCC 129004 >seq964 Length=398110 Score = 100 bits (110), Expect = 2e-15 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 || || || ||||||||||| |||||||||||||||||||| ||| | ||||||||| Sbjct 272808 TGCACTCTCATTTTGACAGAAGGAGATTCAGCTAAAACATTAGCTGTTTCTGGCCTTGGA 272749 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 ||| | || || || | | |||||| || ||||| |||||||| || | ||||| || Sbjct 272748 GTTGTGGGTAGGGACAAATTTGGAGTATTTCCACTGCGAGGAAAAATTCTTAATGTACGG 272689 Query 400417 GATGC 400421 || || Sbjct 272688 GAAGC 272684 >seq488 Length=331261 Score = 93.3 bits (102), Expect = 3e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 282321 CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 282380 ||||||||| ||||| | ||||| || | ||| ||||| ||||| |||||||||| Sbjct 229409 CTTTGTCTTCAACCTTATCTAATCCATAAGCTAGAGCTGCAGCTGTTGGCTCATTAATAA 229468 Query 282381 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426 |||||||||||| | |||||||| ||| |||||||||||||| Sbjct 229469 CTCTCAAAACATTCAATCCAGCAATCTGTCCAGCATCTTTAGTGGC 229514 >seq1186 Length=256696 Score = 89.7 bits (98), Expect = 4e-12 Identities = 135/192 (70%), Gaps = 9/192 (5%) Strand=Plus/Plus Query 1079027 AAGAATCATTGAATTAGAAACGTATCCAAAATTTTCGTATTGTTTCATTGCACACGACAA 1079086 ||| | ||| ||||||| || | ||| | ||| | |||||| ||| | || || Sbjct 208029 AAGTAGCATAGAATTAGTGACTTGCCCATATAATTCCTGTTGTTTTGCAGCATAGGATAA 208088 Query 1079087 ATTAATCAAATTCCAAGCAATAATTCCGGGTCTACCATTAAAAAACAGTTTCAAATCA-- 1079144 |||||||||| |||| | | |||||| |||| ||||||||||||| ||| |||||| Sbjct 208089 ATTAATCAAAGTCCATCCTACAATTCCAGGTCGGCCATTAAAAAACAATTTAAAATCAAA 208148 Query 1079145 ----GTTCCAAATATTTCAGGATTAAATTCAATACCCATAACAATATCATAAAATAATTT 1079200 |||| || | |||||||||||||| ||||| | | ||||| || || || Sbjct 208149 CCACTTTCCCAAGCGT---GGATTAAATTCAATTCCCATCATGAAGTCATAGAAGAAATT 208205 Query 1079201 TCCTGTAAATTT 1079212 || || ||||| Sbjct 208206 GCCAGTGAATTT 208217 >seq3411 Length=243986 Score = 86.0 bits (94), Expect = 5e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| ||||||| || ||||||||||| || ||| | || ||| | ||||| | | Sbjct 201041 TGTACATTAATTTTAACTGAGGGAGATTCTGCCAAATCTTTAGCTGTCTCTGGTTTAGGT 201100 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 ||||||||||||||| ||||| || || ||||| || |||||| || | || ||| | Sbjct 201101 GTTATTGGAAGAGATAGATATGGGGTATTTCCACTCAGGGGAAAAATTCTTAACGTTCGT 201160 Query 400417 GATGC 400421 || || Sbjct 201161 GAGGC 201165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3726078461682174