Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq1276 91.5 1e-13 >seq1276 Length=262737 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 21115 CTATGTTTCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTG 21174 |||| || ||| || ||||| || | || |||||| | ||| | |||||| |||| || Sbjct 236850 CTATTCTTGTAGTATATGGGGACCAACTTGTGATGGCCTTGATCGTATTGTTGAGCGTTG 236909 Query 21175 TGAACTGCCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAG 21234 || || ||||| ||||| || || || ||| | | |||||||||||||| || || | Sbjct 236910 TGGCCTACCAGAACTTCAGGTTGGAGATTGGATGTTGTTTGAAAACATGGGAGCCTATA- 236968 Query 21235 CTTGGTCAG-CTCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTT 21293 || | ||| | |||| ||||| || || || | | |||| || |||||||| || | Sbjct 236969 CTGTGGCAGCCGCTTCTACCTTCAATGGATTTCAGAGGCCAACAATACACTATGTAATGT 237028 Query 21294 CA 21295 || Sbjct 237029 CA 237030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461828169346320