Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq7643 165 2e-35 seq1135 145 1e-29 seq25499 118 2e-21 >seq7643 Length=26413 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| |||||| || | || || || || || ||||| || || || || || Sbjct 24584 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 24525 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || |||||||||||||| || || ||||| |||||||| Sbjct 24524 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGAGGA 24465 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || || ||||| || || ||||| ||||| |||||| | || || || Sbjct 24464 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTTGGCTCCACC 24405 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 || | || || |||||||| ||||| ||||| ||||| ||||||||| || Sbjct 24404 TCTAGGGTGATGGTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCATTTTT 24354 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| |||||| || | ||| ||||| || || ||||| || || || ||||| Sbjct 24812 CCACCCCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 24753 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || |||||||| || |||||||||||||| | || || ||||| ||||| Sbjct 24752 AGGGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGAGGA 24693 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| ||||| || || ||||| || || ||||| || ||| | || || || Sbjct 24692 ATGCCTTCCTTGTCTTGGATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCCACC 24633 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||| || || || ||||| || || |||||||| Sbjct 24632 TCCAGGGTGATGGTCTTCCCAGTTAAGGTCTTCACGAAGATCTGCAT 24586 >seq1135 Length=474297 Score = 145 bits (160), Expect = 1e-29 Identities = 136/173 (79%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 60139 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGT 60198 |||||| |||| |||||||||||||| ||||| ||||| || ||||| | || || | Sbjct 61630 GATAGCAGGAGCTTTATGGTGGTACTACATATCAAAAGGGATTGAATATCTGGACACAAT 61689 Query 60199 GTTTTTCATACTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTT 60258 || ||||| || || || || |||||||| | |||||| | || || ||||| ||||| Sbjct 61690 ATTCTTCATCCTAAGAAAGAAATTTAATCAAATCAGTTTTCTTCATGTCTATCACCATTT 61749 Query 60259 TACTATGTTTACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311 ||||||||||||||| | ||| | ||||| |||||| |||| ||||| |||| Sbjct 61750 CACTATGTTTACTTTATGGTGGATTGGCATCAAATGGGTTGCAGGAGGACAAG 61802 Score = 95.1 bits (104), Expect = 2e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 60443 CAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGTCCGTTTCCA 60502 || |||||| | |||| || || ||||| ||||| ||||| || ||||| || ||||| Sbjct 65446 CAGTTCCATGTGACTATTGGCCACACCGCCATGTCTATTTATATTGATTGCCCCTTTCCT 65505 Query 60503 AAATGGACACAATGGTCAGTTATCATTTATTCTATTACTTTTATATTACTGTTTGGTAAC 60562 ||||||| || ||| || || | ||| || ||||||| | |||||||||||| Sbjct 65506 AAATGGATGCACTGGGGTGTCATTTTCTATGCTGCCTCTTTTATTGTTCTGTTTGGTAAC 65565 Query 60563 TTCTATTTTAGAACATACAAGA 60584 ||||| | | | |||||||||| Sbjct 65566 TTCTACTATCGGACATACAAGA 65587 Score = 84.2 bits (92), Expect = 4e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 60310 AGCATTTTTCGGAGCTCAGTTGAATTCCTTAATCCATGTTATTATGTATACTTATTATGG 60369 ||||||||| |||||||| ||||| | ||||| |||||| ||||||| || ||||| Sbjct 63800 AGCATTTTTTGGAGCTCATATGAATGCTTTAATTCATGTTGTTATGTACCTGTACTATGG 63859 Query 60370 TATGGCGGCGTGTGGACCTATGTTTAAAAAGTATTTATGGTGGAAGCGTTATCTTACTAT 60429 | || || ||||| || | ||| | || || | |||||||| || || | || || Sbjct 63860 ACTAGCTGCCTGTGGCCCAAAGTTCCACAAATACCTTTGGTGGAAACGGTACTTGACCAT 63919 Query 60430 AATGCAATT 60438 ||||||||| Sbjct 63920 AATGCAATT 63928 >seq25499 Length=1430 Score = 118 bits (130), Expect = 2e-21 Identities = 163/227 (72%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| |||| | |||| || | || || | ||||| || | || | || ||||| Sbjct 162 CCTCCCCTCAGATGCAGGACAAGATGGAGGATGGATTCCTTTGGGATGCTGTAGTCAGAG 221 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || || | | | ||||| || || |||| ||||||||| || || ||||| ||||| || Sbjct 222 AGGATGCGATCATCTTCCAGCTGCTTTC-AGCAAAGATCAGCCTCTGTTGGTCTGGCGGA 280 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||||||||| |||||||| || || | ||||||| | || ||| |||| | Sbjct 281 ATGCCTTCCTTATCCTGAATCTTGGCATTGAGATTTTCAGTGGTGTCACCGGGTTTCAAC 340 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||| || || || || || | || |||||||| Sbjct 341 TCCAGGGTGATGGTCTTCCCAGTTAAGGTATTGATGAAGATCTGCAT 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 978098601059261